| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0670 |
|---|
| Symbol | |
|---|
| ID | 7271814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 666665 |
|---|
| End bp | 667348 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643569314 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002465760 |
|---|
| Protein GI | 219851328 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.591564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAG CAGACAGGAG ACAGCGGGAG AAGGAGCAAC GGAGAACTGA GATCCTCGAA
GCAGCCGAGC GACTCTTCTT CTCCCGTGGG TATGACGATG TCGCTATGAA CGATATCGCT
CAAGAAGTCG AGTTGAACAA GGCAACCCTG TACCTCTATT TTGAAAACAA AGAGGCGCTC
TTCTCGGCGA TCGTCCTGAG AGGATTTGCC CGCCTCAACC GCATGTACCA CGAATGTATG
GAGATGGAGG TCTCCGGCAT CACCAGGGTA GGGCTCTTAG GGGACGCATA TTACCGGTTC
AACCGGCAGT ATCCGGATTA CGTCAGGACT ATGCGGTATT ATGGATCAGA GCGATTCCGA
AATGACACCA GCCCGGAAGC TGCCGAGATC CTTGCGGCAT CGGGAGAAGC CCACAATCTC
ATCTGCTCAG CGGTGCAGCA GGGGATCGAC GACGGGACGA TCCGGAACGA TCTCGATCCG
ATGGAGATCA CGCTCTACCT GATGATCACC TTCATGAGCA TCCTGTCACT CGGAGAGAAG
TGGATAGCCC TCCTTGATGA ACGAGGTATC AGCAGCGAGG CGTTCGCCGG GAATTTCCTG
CGGTTCATCG GGCCGGCCGT GGAAGCCCGG ACACCCCCAC AAGACGCCGG CATAGACGAG
AGAAAATCCG ACGATCGAGT CTGA
|
|---|
| Protein sequence | MAIADRRQRE KEQRRTEILE AAERLFFSRG YDDVAMNDIA QEVELNKATL YLYFENKEAL
FSAIVLRGFA RLNRMYHECM EMEVSGITRV GLLGDAYYRF NRQYPDYVRT MRYYGSERFR
NDTSPEAAEI LAASGEAHNL ICSAVQQGID DGTIRNDLDP MEITLYLMIT FMSILSLGEK
WIALLDERGI SSEAFAGNFL RFIGPAVEAR TPPQDAGIDE RKSDDRV
|
|---|
| |