| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0663 |
|---|
| Symbol | |
|---|
| ID | 7271807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 658019 |
|---|
| End bp | 658786 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643569309 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_002465755 |
|---|
| Protein GI | 219851323 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0457] FOG: TPR repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAAC CGGCCGACAC GAGGAAGGTG ACTGGGAAGG TTTTTTGGCT AAGAATGCCG
GTTACCGCCC TTATCGTACT TCTTCTTGTA ACGCTTCTCT GTGTACCGAC ACAGGCTGTC
CTTCTCTCTG CAGGGAACAG TACCGTACCT CCAGTTGGCA GCCCGCTGAG TGCTGCGGCC
TATGAGAAGA TGGGAATGGC CCTGATGGCA GAGGAGAACT GGAGCCGGCT GATTGCAACC
ACCGATGCAG GGCTGGCCCT GTATCCCGAC GACCCCGAAC TGTACTGCCT GAAGGGATAC
GCACTCCGCA AAACCGGCCA TTATGCCGAA GCTGCCGATA ATGTCTCTCA TGCTATACCG
CTGGACCCAC GGCCGGTCAG GTATGCAAAC CGGGGATATG CCCTGCTCGC GCTGGGGCAC
TACGATGACG CTCTGAAGGA TGCGAATGCC GCACTCTCCC TCAACGGGTC CTATCCCCCG
GCGCTTGGGA TCAGATCATT CGCCCTGCTC CATACCGGCA ACCTGACCGG GGCTTTACAG
GCAGTCGACG CCGCCAGGTT GCTTGACCCG GAGAACCCCC TGTACTGGCA TCTGAAAGGG
AAAGTACTGG CAGCTTCAGG GAATTGTTCA GGTGCGGCCG ATGCGTTCAG GCAGTCCATT
GCGATCAATC CGGATTATAC CCTCCCCTGG CCGGAGTTTG GGAACGCCAC GACCGACCTT
GAGAACCTCA ACACACCCTG TACACCGCCC AGCCTGATGA CGGCGTAG
|
|---|
| Protein sequence | MIEPADTRKV TGKVFWLRMP VTALIVLLLV TLLCVPTQAV LLSAGNSTVP PVGSPLSAAA
YEKMGMALMA EENWSRLIAT TDAGLALYPD DPELYCLKGY ALRKTGHYAE AADNVSHAIP
LDPRPVRYAN RGYALLALGH YDDALKDANA ALSLNGSYPP ALGIRSFALL HTGNLTGALQ
AVDAARLLDP ENPLYWHLKG KVLAASGNCS GAADAFRQSI AINPDYTLPW PEFGNATTDL
ENLNTPCTPP SLMTA
|
|---|
| |