| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0587 |
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| Symbol | |
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| ID | 7270171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 580085 |
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| End bp | 581572 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643569232 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_002465681 |
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| Protein GI | 219851249 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.294398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.540426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGGG CAGAATCTGA GGAGGAGAAG AATGCACGGA TCGATGGCGA GAAAAGTTTC
TCGACTGATG TCCTCAAACT CGTAACTGGG ACCACCCTGG CACAGGTGAT AGTGGTCCTT
GCTTCACCAG TGCTGACGCG GATGTATACG CCTGAGGCTT TCGGCCTACT GGCGGTCTTC
ACTGCGATCA CCAAGATCCT GAGCGTCGTC GCCTGCCTGC GGTACGAGTT CTCGATCATG
CTCCCTGAGC GGGAGGAGGA TGCGGCCAAC CTGCTTGGTC TCTGTCTGCT CGTGGTGACT
GTCATCTCGG TGCTGACAGT TCCACTGATC TGGATTGGGG AAGGACCATT CCTGGAACTG
CTCAATGCGG AGTCCCTCGC CGGTTATCTC TGGCTCATTC CGCCGTTCAT CTTTATGACC
GGTGTTTTTC TGGCGCTCAA CTACTGGAAC TCGCGATCCC GCCACTATGG GCGTCTCTCG
ATGGCGCGAA TGGTATCTTC CCTGGCGATC ACCGGCGCAC AGGTGGGCGC CGGCGGGGTT
GGGATGGCGA CCAGCGGCAG CCTGATCGGT GCGAATGTCT TCGGAACAAC GGTGGCCACC
CTGATCCTCG GCTGGCAGAT CGCCCGAGAC GACCTCGCCC TGCTTCGGCG GGAGATCTCC
TGGAGTGGGA TGAAGGCCGG GATGATCCGG TACAAGAAGT TCCCCCTCTT TGAGTCCTGG
TCCGGGCTGC TCAATGTTGC CTCCTGGCAG CTCCCCTCGT TTCTGCTCGC AGCCTACTTC
TCGACGACGG TGGTCGGATA TTATTCACTT GGGTTCAGGC TGATCCAGAT GCCGATGGAT
CTGATCGGCG GCGCTATTCA GCAGGTCTTC TTTCAGCGAG CTTCGGACGC CCAGAAGCAT
GGATCGCTCA GTGTCCTGAC CGAGAGCGTC TTTGGGGTGC TGCTGAAGAT AGGTCTATTT
CCAATGCTGC TGCTCTCAAT GATGGGGGAG GAGCTCTTTG TCCTGGTCTT TGGGAGTGCC
TGGGGGGAGG CTGGTTTCTA TACTCAGTTG CTCAGTGTAT GGGCCCTTAT CTGGTTCATT
ACCTCTCCAC TATCGACCAT CTACATGGTG CAGGAGAAGC AGGGTTTTGG TTTGAAAGTC
AATATTGCGA ACTTTGTTAC CCGACTGCTC GCCCTGGTCG TCGGGGGAAT GCTCGGCAGC
GCCCGTCTTG CAATCTTCCT CTTTGCGGTC TCAGGGATCG CTGTGTACGG GTATCTCTGT
CTGCAGCTCC TCTCATTCAG TGGAGTGCCG CTCAGAAGGA CGTTCAGGAT TGTTCTCTCC
AATGTGGCAC TTTTTGTGCC GGCTGGGGTG CTGATCATGA TTCTCAAATG TTGGGGTATC
TCTCCTCTTA TCCAGATGGT CGTGGCCGGT GCCTGCGCCC TGGTCTATTA CCTGTATACA
CTCAAGACAG ATCCCCAGAT CAAGGAATTG CTGGCGGGTT TCGCCTGA
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| Protein sequence | MSGAESEEEK NARIDGEKSF STDVLKLVTG TTLAQVIVVL ASPVLTRMYT PEAFGLLAVF
TAITKILSVV ACLRYEFSIM LPEREEDAAN LLGLCLLVVT VISVLTVPLI WIGEGPFLEL
LNAESLAGYL WLIPPFIFMT GVFLALNYWN SRSRHYGRLS MARMVSSLAI TGAQVGAGGV
GMATSGSLIG ANVFGTTVAT LILGWQIARD DLALLRREIS WSGMKAGMIR YKKFPLFESW
SGLLNVASWQ LPSFLLAAYF STTVVGYYSL GFRLIQMPMD LIGGAIQQVF FQRASDAQKH
GSLSVLTESV FGVLLKIGLF PMLLLSMMGE ELFVLVFGSA WGEAGFYTQL LSVWALIWFI
TSPLSTIYMV QEKQGFGLKV NIANFVTRLL ALVVGGMLGS ARLAIFLFAV SGIAVYGYLC
LQLLSFSGVP LRRTFRIVLS NVALFVPAGV LIMILKCWGI SPLIQMVVAG ACALVYYLYT
LKTDPQIKEL LAGFA
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