| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0581 |
|---|
| Symbol | |
|---|
| ID | 7270165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | - |
|---|
| Start bp | 575402 |
|---|
| End bp | 576289 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643569226 |
|---|
| Product | protein of unknown function DUF201 |
|---|
| Protein accession | YP_002465675 |
|---|
| Protein GI | 219851243 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1821] Predicted ATP-utilizing enzyme (ATP-grasp superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0946746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.163854 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGC TCATTGCAGA GTATACGATG ACGAGAGAGC CGGCCTGTGC AGAGGAAGGG
AGAGCGATGC TTGAGGTGCT CTCAGCGTCT TTTGAACGGT GCGGCTACGA GGTACTGACT
CCTGAGGGGG ACGATTTTTC AGAGGAGATC CGACGCCTCG CCCCCCTCTG CGATGTTGGA
CTGGTGATCG CCCCCGACCC ACTCCTCGCC GGGTTCAGCG CGACCCTTGA ACACCTGACC
AACAACATTG GTTGCGGTTC GATGAGCGTC GCAGTCTGTG CCAATAAACT GCGAGCTAAA
ACGGTCCTCG CCAAACATGG TGTCCCTGTG CCGGAGTTGA TGACGGCAGG GCTGCGAATC
GTAAAGCCGA TCAGGGGATA CGGTAGTGCC GGGGTGCGCC TGACTGACGA GCCGGCAGGG
GAGGTAGAGT TTGGGGAGCG GTTTATCGAG GGAGAGCACA TTTCGGTCAG CATGGTCGGT
TCCCGTGTCG TTGGGGATGC CTGTGACAAC TATTCAGGCG ATCCGCCCCT GCTGCTGGCC
GTGAACAGAC AGACGATCAG CCAGGGACCG GATGGCCAGA TCCGATACCT GGGCGGTGAG
ACCCCCATCG ATCACCCCCG CCAGGATGAA ATCGTTGCGA CTGCTGCACT GGCATTGAAC
CGGCTCGGCT GCCAGGGTTA TACCGGGGTC GATATGGTTG TGGCGGACCA CTGCTATGTG
GTCGATGTGA ACCCCAGGAT CACGACGAGC CTGGTCGGTA TCGCCGCCTG TATGGAGGAG
GAGATCGCCG ACGTGCTGGT CAATGCGTCG CACGGCAGGG GACCCGGATC GGTTCACCTG
TCCGGCAGCG TCCGGTTCGA TACCCACGGC GGAGTCACCA GATTATGA
|
|---|
| Protein sequence | MKALIAEYTM TREPACAEEG RAMLEVLSAS FERCGYEVLT PEGDDFSEEI RRLAPLCDVG
LVIAPDPLLA GFSATLEHLT NNIGCGSMSV AVCANKLRAK TVLAKHGVPV PELMTAGLRI
VKPIRGYGSA GVRLTDEPAG EVEFGERFIE GEHISVSMVG SRVVGDACDN YSGDPPLLLA
VNRQTISQGP DGQIRYLGGE TPIDHPRQDE IVATAALALN RLGCQGYTGV DMVVADHCYV
VDVNPRITTS LVGIAACMEE EIADVLVNAS HGRGPGSVHL SGSVRFDTHG GVTRL
|
|---|
| |