| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0519 |
|---|
| Symbol | |
|---|
| ID | 7271935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 523238 |
|---|
| End bp | 524476 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643569166 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002465615 |
|---|
| Protein GI | 219851183 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1232] Protoporphyrinogen oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.696387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.911419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT GTATCATCGG CGGAGGATTG GCAGGTCTCA CTGCAGCGCT CGACCTCTCT
GGGGATCATT CCGTGGAACT CCTTGAGCGG CGCCCATTTC TTGGCGGTTG TCTCTCATCT
CTTTCGCGTG AACACTATAC CATAGAACAC TACTATCATC ACTGTTTTGA GGGGGACAGC
AACCTCTTCT CGTTGATGGA ACAACTGGGG ATAAGCGACC GGCTCGAATG GCTGGAGGGG
AGCACCGGGT ATTATGTGGA TGGGGCCGTT CATCCCCTGA CCACGCCACG GGAGATCCTC
GTGTACCCCT ATCTGTCGTT GCTCGACAAG GCCCGACTGG CCCTGCTGAC GCTCCGTGCA
AAGCGGATGG ATCGGATAAA ACTCGATGAT GTTCCAGTAA AGCAGTTTCT GGTTGAACAG
GTGGGGATGA ACGCCTATAC TTCCTTCTTT GAGCCGCTGC TCAAATCAAA GTTCGGGGCC
ATGCGAGACC AGATCTCTGC AGCCTGGCTG ATATCCCGGA TTGCGATCAG GTCCAACCGG
ACCACTGGAG GGGAACGGCT CGGTTATCTG AAAGGAGGTT TCTCGATCCT GATCGATCGG
CTGGAACAGG TCCTCTCCGA CCGGGGGGTT TCCATCCAGA CCGGCACCCC GGTCGAGAGT
ATGCAACGAT CCGGTCTTGA ATGGATCGTG AATGGGATCC GGTATGATAC GGTCATCTCG
ACGATCCCGC CACAGGAACT GGCCAAACTG AGCGGGGTTG AGTTCCCTGC GATCCCATAC
CAGGGGGCGG CCTGCATGAT CCTCGCTCTG GACCGTGATG TGACGGAAGG GATATACTGG
CTGAATATGA AGGATCCTGC ACCGTACGGG GCAGTGGTCT CGCACACTAA CTTTGCACCC
CTGGAACGAT ATGGCGAACA TCTGGTCTAT CTGGCTTCGT ACTTCAGCGG TACCCTTCCT
GACCAGCACG GTCAGAGGAT GAAGGAGGAC TTCTGCACGC GTTTCAATGT CACGGACGAG
ATGATCCACT GGCAGCACCT TGAGGTGGAT CCCTGGGCCG GTCCGGTTTA TACCACAGGA
TACCGGCAGA TGATCCCCAA CTATGAACAG TACGGTCTTT ATATGGCTGG CATGTTCAGC
AGGCCCAACT ATCCAGAACG GTCGATGGAG GGTTCGATCA CCGCCGGCAG ACAGGTGGCA
ACCTGTGTCC GGCGGAGGAT GGCCCATGAC CAGCATTGA
|
|---|
| Protein sequence | MKICIIGGGL AGLTAALDLS GDHSVELLER RPFLGGCLSS LSREHYTIEH YYHHCFEGDS
NLFSLMEQLG ISDRLEWLEG STGYYVDGAV HPLTTPREIL VYPYLSLLDK ARLALLTLRA
KRMDRIKLDD VPVKQFLVEQ VGMNAYTSFF EPLLKSKFGA MRDQISAAWL ISRIAIRSNR
TTGGERLGYL KGGFSILIDR LEQVLSDRGV SIQTGTPVES MQRSGLEWIV NGIRYDTVIS
TIPPQELAKL SGVEFPAIPY QGAACMILAL DRDVTEGIYW LNMKDPAPYG AVVSHTNFAP
LERYGEHLVY LASYFSGTLP DQHGQRMKED FCTRFNVTDE MIHWQHLEVD PWAGPVYTTG
YRQMIPNYEQ YGLYMAGMFS RPNYPERSME GSITAGRQVA TCVRRRMAHD QH
|
|---|
| |