Gene Mpal_0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0494 
Symbol 
ID7271910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp503222 
End bp503737 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content57% 
IMG OID643569141 
Productperiplasmic component of the Tol biopolymer transport system-like protein 
Protein accessionYP_002465590 
Protein GI219851158 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTGGG CGTTCATCGT CCTGCCGGCT CTGGTTATCG CCCTGGTAGC GGCTCTGGTC 
CTCGTCCAGA GTGGAACCGC TGCCGACCCC CTGAAGATCA ATGGTATCCG ACTCTCCTCG
GCCGATTCAG AGCCGAATTA TCCCACGATA TCAGGTCAGT ATGTGGTCTG GGAGGAGGAT
CGAGGAGTAG ATGCTCAGAT CTGGCTGTAC AACCTGACGA CAAACTCCAG CCGCCCTCTC
TCCCCGCATC TGGGGAACCA GTTCGCGCCG GCCATCTCTG GTGATCGGGT GGTCTGGCAG
GACAAGCGGA ACGGGAATTG GGATATCTAT CTGTACAACA TCACGACTGG TGTGGAGGCC
CCGGTCTGCA CGGATCCTGC AAAACAGGTC AGACCACGGA TTTCCGGAGA TGCTATCGTC
TGGACAGATT ATCGGAATGG CAATCCTGAC ATCTACCGGT ACGATCTCGG TACCCAGACA
GAGCAACCTG TCTGTATTGA CCCCGCAACG CAGTAG
 
Protein sequence
MRWAFIVLPA LVIALVAALV LVQSGTAADP LKINGIRLSS ADSEPNYPTI SGQYVVWEED 
RGVDAQIWLY NLTTNSSRPL SPHLGNQFAP AISGDRVVWQ DKRNGNWDIY LYNITTGVEA
PVCTDPAKQV RPRISGDAIV WTDYRNGNPD IYRYDLGTQT EQPVCIDPAT Q