| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0463 |
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| Symbol | rpl30p |
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| ID | 7272787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 469615 |
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| End bp | 470076 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643569109 |
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| Product | 50S ribosomal protein L30P |
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| Protein accession | YP_002465560 |
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| Protein GI | 219851128 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle
[TIGR01309] 50S ribosomal protein L30P, archaeal |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATGCGG TTGTACAGGT GCGCGGTGTT GTGAACACCC GCCGTGACAT CAAGGATACG
CTGAAGATGC TTCGTCTCCA TCATATCAAT CACTGTGTCT TCCTCCCTGA TACCCCTGAA
ATTCTCGGGA TGATCAGGAA GGTCAAGGAC TATGTCGCCT ATGGCGAGGT GGATGAGGCC
ACCCTTGAGA CGCTGATGCG GACACGCGGA CGGCTTGAAG GGAACGATGC ACTCACTGAC
GAGTACCTGA AGGAGAACTC AGAACTCAAC GGAATTGCAG ACCTTGCAAA GGCGATGATC
GAAGGTACGG TACGCATCAG GGATGTCCCT GGATTGAAGC CGGTCCTTCG TCTCCACCCG
CCGAGAAAGG GCTACAAATC GCTGAAGAGG ACATATCCAC AGGGAGGAGC GCTTGGTTAT
TATGGCCAGG AGATCAATGC TCTTCTCTAT AAGATGAGGT GA
|
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| Protein sequence | MYAVVQVRGV VNTRRDIKDT LKMLRLHHIN HCVFLPDTPE ILGMIRKVKD YVAYGEVDEA
TLETLMRTRG RLEGNDALTD EYLKENSELN GIADLAKAMI EGTVRIRDVP GLKPVLRLHP
PRKGYKSLKR TYPQGGALGY YGQEINALLY KMR
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