| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0448 |
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| Symbol | rps3p |
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| ID | 7272772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 462956 |
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| End bp | 463660 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643569094 |
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| Product | 30S ribosomal protein S3P |
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| Protein accession | YP_002465545 |
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| Protein GI | 219851113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0404742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.454808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTCG AGAGAAAGTT CGTCGCCGAA GGCGTCCGTA AGGTCCGTGT CGAGCGGTTT
CTGCTCCGGG ATCTGAAGAG GGCAGGATAC GGCGGCATGG ACATCGCCCG CACCCCCCTC
GGTACGCAGG TTACGATCTA TGCAGAGAAG CCCGGTATTG TGATCGGGAA GGGTGGAAAG
GTTGTCAGGC AGCTGACTCA GGACCTTGCG ACCACCTATG GAATCGAGTC CCCGCAGATC
GAGGTTCAGC AGGTGCAGAA CCCCAACTAC AACGCCCAGA TTATGGCAGA GCGACTGGCC
AATGCGCTCG AGCGCGGCTG GTACTTCAGA AAGGCAGGAT CCAACGTGGT CCGCCGTGTG
ATGGAGTCCG GTGCACTCGG GTGTGAGGTC GTCCTTTCCG GTAAATTGAC TGGTGCTCGG
GCACGGGTCC AGAAGTTCAC CGAGGGCTAC ATCAAGCACT CTGGCGAACC GAGCATCACG
ATCGTTGAGA AGGGATATGC AATCGCAATC AAGAAACTTG GCACCATTGG TGTGCAGGTC
AAGATCATCC CGCCGGATGC CAAGCTCCCT GACCAGTTCG AGATCCTCGA TGTTAAGAAG
CCCGAGATCC CTGCAGAGCA GGAAGAGATC GCGGTGGTTG ATATCGGTGA GGAGATCGAT
GCAGAACTTG CGAACACCCC GGACGAGTAT GGCGAGGTGC AGTGA
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| Protein sequence | MAVERKFVAE GVRKVRVERF LLRDLKRAGY GGMDIARTPL GTQVTIYAEK PGIVIGKGGK
VVRQLTQDLA TTYGIESPQI EVQQVQNPNY NAQIMAERLA NALERGWYFR KAGSNVVRRV
MESGALGCEV VLSGKLTGAR ARVQKFTEGY IKHSGEPSIT IVEKGYAIAI KKLGTIGVQV
KIIPPDAKLP DQFEILDVKK PEIPAEQEEI AVVDIGEEID AELANTPDEY GEVQ
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