| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0416 |
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| Symbol | |
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| ID | 7271442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 432579 |
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| End bp | 433877 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643569061 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_002465513 |
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| Protein GI | 219851081 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.741705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGTTA TGCATAGCCT GATCCATGAA TGTCTCCATG GTGTGCCTTC AGAGGTCGAA
ACCATTGCAC GGGACGAAGG ACTTGTACCC CGACAGGCCG CACGCGCCGT CGCACGGGGC
AGGATCGCCG TGCTTGCCAA CCCGGTTCGG CCACATCGGA TCGCTGCGGT CGGCGAGGGG
TGCCGGGTCA AGGTGAACGT GAACATCGGC ACCTCTGGAC AGCGGTGCGA CCCGGTTCTT
GAGATGGAGA AGGGGCGGGC GGCTCTGGCC GAGGGTGCCG ACGCGCTGAT GGATCTATCG
ACCGGCGGGG ATCTGCAGGC GATTCGAAAG GAGATCCTGA CCCTCGACGC TCCGGTCGGG
ACGGTTCCGA TCTATGAGGC GGTCCGGCGA GCCGGGAATG TCACCGACGT CGACGCCGAC
CTGCTCTTCC GGGTGATCCG CGAGCACTGC AAGCAGGGGG TCGACTTCCT GACCCTCCAC
TGCGGGGTGA ACCTGCAGGC CCTCGATGCG CTGAAGTCCG ACCCGCGGAT CATGGGCGTC
GTCTCCCGCG GCGGGTCGTT CCATGTCGCG ATGATGCTCT CGAGCGGTGA GGAGAACCCG
CTCTATGCCG AGTTCGATTA CCTGCTCGAG ATACTCGCCG ACACCGGCGT CGTGATCAGT
CTCGGTGACG GGATGCGCCC GGGGTGCATG CAGGATGCCG AGCGGCATGC AAAGGCGACC
GAGTACCTCA CGCTCGGCCG GCTGGCCAAA CGCTCGCTCG ATGCTGGGGT GCAGCGGATG
ATCGAGGGGC CGGGGCACAT TCCGATCACG CAGGTCGGTT ACAATGTGAA GATGATCAAG
GAACTGACCG ATGACGCTCC CCTGTATCTG CTCGGGCCGC TGGTCACCGA TATCGGGGCC
GGCTACGACC ACGTGGTCGG TGCGATCGGA GGGGCGATCG CCTGTATGAA CGGGGCCGAC
TTCCTCTGCA TGGTCTCCCC GAGTGAGCAC CTGGCCCTGC CGGACGTGCA GGACATCATC
GAGGGGACCC GCGTTGCCTG CCTGTCTGCT CATATCGGGG ACCTGGCACG GGACCCGAAG
GGGCATTACA TGCAGCGCGA GGTGCAGATG GCAGAGGCCC GGCGGAGGCT CGACTGGGAC
GAGCAGTTCA AGCTGGCCCT CTTCGGTGAG CGGGCGAAGG CGGTCCATGT CCGTGACGGC
GAGACCGAGA CCTGTTCTAT GTGCGGGGAT CTCTGTGCAC TCAAGATCGT GGATAAACTG
CTCCCTGCAC CTGATGTGAC TCCAAAAAAA GAAGAATAA
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| Protein sequence | MCVMHSLIHE CLHGVPSEVE TIARDEGLVP RQAARAVARG RIAVLANPVR PHRIAAVGEG
CRVKVNVNIG TSGQRCDPVL EMEKGRAALA EGADALMDLS TGGDLQAIRK EILTLDAPVG
TVPIYEAVRR AGNVTDVDAD LLFRVIREHC KQGVDFLTLH CGVNLQALDA LKSDPRIMGV
VSRGGSFHVA MMLSSGEENP LYAEFDYLLE ILADTGVVIS LGDGMRPGCM QDAERHAKAT
EYLTLGRLAK RSLDAGVQRM IEGPGHIPIT QVGYNVKMIK ELTDDAPLYL LGPLVTDIGA
GYDHVVGAIG GAIACMNGAD FLCMVSPSEH LALPDVQDII EGTRVACLSA HIGDLARDPK
GHYMQREVQM AEARRRLDWD EQFKLALFGE RAKAVHVRDG ETETCSMCGD LCALKIVDKL
LPAPDVTPKK EE
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