| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0339 |
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| Symbol | |
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| ID | 7272643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 361025 |
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| End bp | 362806 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568991 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_002465444 |
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| Protein GI | 219851012 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.618473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA GTGCAAAGAT CGCAAAGATC AGAACGCCCA TCGTCTGTGT GCTTGGACAT
GTGGATCATG GAAAGACATC ACTGCTCGAC CGGATACGGG GATCGTCGGT GGTCAGCTCC
GAGGCAGGAG CCATCACTCA GCACATCGGG GCGACACTGG TCCCAATCGA GGCCATCCGA
GCGATGTCGA CGAGCATGCA GAAGATCCCG GTGACAGTGC CCGGGCTGCT CTTCATCGAT
ACCCCGGGCC ACCATGCGTT CACGACCCTC CGTGCCCGCG GCGGAGCGCT CGCAGATATG
GCAATCGTGG TCGTCGATAT CAACGAAGGA TTCCAGCCAC AGACCATCGA GGCCCTGCAG
ATCCTGCGGG GATGCAAGAC CCCGTTCGTC GTGGCCCTGA CCAAGATCGA CCGGGTCCAT
GGCTGGCGGG TGGTGGAGAA CGCACCGTTC CTGACCACTT TCGCACAGCA GAATGAACGG
ATCCAGGAGT TCATGGAGAC TCGCCACTAC GAGATCGTCG GAAAACTGTC AGACCTCGGG
TTCAACTGCG AGCGATTCGA CCGGGTACAG GACTTCGCAC GAAACATCGC GATCGTCCCG
ATCAGTGCCC ATACAGGGGA AGGTATCGCC GACCTCCTGA TGGTGATGAT CGGCCTGGCC
CAGCGGTACA TGGAGCAGTC GCTGGCGATG AGTGTCGACG GACCGGGATG CGGAACCGTC
CTCGAGGTGA AGGAGGAGCG GGGGCTCGGG CCGACGCTGG ATGTGATCCT GTATGACGGG
ACCCTCTCGG TCGGGGACGA GATCATGCTC GCCTCAGAGG ATGGCGTGAT CACCACCAAG
GTCAGGTCCC TCTTAAAGCC GCGGCCGATG AAGGAGATCC TGACCGAGGA GCGGTTCGAG
CGGGTGAAGT CCGTCGTGGC GGCATCAGGG GTGAAGGTCG CGGCCCCGAA TCTGGACAGG
GTGATCGCCG GCTCCCCGCT TCGAGGCGTC CGGGGTGACC GGGAGGCAGT GGCCACCCAG
ATCCGACAGG AGATGGAGGA GATCCATGTT AAACTGGTCG AAGACGGGCT GGTGATCAAG
GCGGACACGA TCGGGGCCCT TGAAGCCCTC TGTCAGGAAC TGGAGAATAA GGAGATCGGG
GTGATGCGTG CGGCTGTCGG TCCGGTCAGC CGGCACGACC TGATCACCGC CGAGACGATC
AAGAACCCGC TGTATAAGGT GGTCCTGGCC TTCAATACGC CCCTCCTCCC GGATGCAGCA
GATATCGTCA AGGAGACCAA GCAGATGAAG GTCTTCTCCG GACGGGTGAT CTACCAGTTG
ATCGACGCAT ACCTGCTCTG GCGTGACCAG CAGAAGCGGG CCATGGAACA GCAGAAGTTC
GAGAATATCA TCATCCCGGC GAAGATCAGG ATCATGCCTA ATTGTGTCTT TCACCAGTCC
AACCCGGCAG TGGTCGGGGT TCAGGTGATG GAGGGAAAAC TCAGAACCGA TGTGAACCTG
GTCCACCTGG ACGGCAGAAA GGTCGGGCAC CTGAAGACGA TCGAGCTCTC GCTGGAGAAT
GTGCATGAGG CTGAGGAGGG TTCAGAGGTC TCCATCGCCA TCGAAGGGGC CACCATAGGG
AGACAGGCCG ATGTCGGTGA TATCCTCTTC GTGGACCTGC CTGAACGGCA TGTGAAGGTG
CTGGAGAAGG AGATGCTCTC ACACCTGACT GCCGGCACCC AGGCGGTGCT TGAGGAGTTC
ACCTCGATGA AGCGGAAGGT CGAGCCCTTC TGGGGCAAGT AG
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| Protein sequence | MAKSAKIAKI RTPIVCVLGH VDHGKTSLLD RIRGSSVVSS EAGAITQHIG ATLVPIEAIR
AMSTSMQKIP VTVPGLLFID TPGHHAFTTL RARGGALADM AIVVVDINEG FQPQTIEALQ
ILRGCKTPFV VALTKIDRVH GWRVVENAPF LTTFAQQNER IQEFMETRHY EIVGKLSDLG
FNCERFDRVQ DFARNIAIVP ISAHTGEGIA DLLMVMIGLA QRYMEQSLAM SVDGPGCGTV
LEVKEERGLG PTLDVILYDG TLSVGDEIML ASEDGVITTK VRSLLKPRPM KEILTEERFE
RVKSVVAASG VKVAAPNLDR VIAGSPLRGV RGDREAVATQ IRQEMEEIHV KLVEDGLVIK
ADTIGALEAL CQELENKEIG VMRAAVGPVS RHDLITAETI KNPLYKVVLA FNTPLLPDAA
DIVKETKQMK VFSGRVIYQL IDAYLLWRDQ QKRAMEQQKF ENIIIPAKIR IMPNCVFHQS
NPAVVGVQVM EGKLRTDVNL VHLDGRKVGH LKTIELSLEN VHEAEEGSEV SIAIEGATIG
RQADVGDILF VDLPERHVKV LEKEMLSHLT AGTQAVLEEF TSMKRKVEPF WGK
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