Gene Mpal_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0288 
SymbolargS 
ID7272588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp320393 
End bp322072 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content61% 
IMG OID643568938 
Productarginyl-tRNA synthetase 
Protein accessionYP_002465394 
Protein GI219850962 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0018] Arginyl-tRNA synthetase 
TIGRFAM ID[TIGR00456] arginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.124809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAG AGACCTATAC CCTGATTGAA CGCGTGCTCA AGGCATGCAC TGATGAGACG 
GAGATCGCCC TGACGGACGG TGGCGAGCAT GCAGACCTCG CATCGACGGT AGCTTTCGCC
CTTGCAAAGA AGCGGCACCA GGCCCCGAAG GTGATCGCCG AGGAACTGGC TGTGACGCTC
GCTGCGAACC CGGAACTGGC TGGTATCCGG GTCGAGGCGC TCGGTCCGTA CCTGAACTTC
TCGTTTGGTC CGAAGTATCT GGAGGAGACC CTGAAGGCCG CTGTACAGGA CAATTTCGGC
ACAGCTCCGA CAAAGCCGGT CAGGATCGTG CTCGAGCACA CCAGTGCCAA CCCGAATGGT
CCCCTGCATG TCGGGCATAT CAGGAACTCG ATCCTCGGGG ATACTCTGGC CCGGGCGTTC
CGGAAGGCTG GCTACCGGGT CGAGGTCCAG TATTATGTGA ACGATATGGG CCGTCAGATC
GCGATCGTGG CCTATGGGTT CGATCACCTG GACACCGGTG CAAAACCCGG GGAGAAGGCG
GACCACCATA TTGCTCGCGT CTATGTCGCA GCGAACCGCG ACCTGGAGGC AAACCCTGAT
AAGGGGGCTG AGATCGACGA GCGGATGCAG TTGATCGAGA AGCGCGATCC GGCGACCGCC
ACCCAGTTCC GTGAGCTGGT CAGCCGCTGC CTGGACGGCT TCAAGGTCAC CATGCAGGGG
CTGAACGTCA AGCACGACCG GTTCATCTGG GAGAGCGACT TCGTAAAGAT TGGGGATATG
GAGAAGGTTC TCGGGCGGCT GGCGAAGATC CCGCAGGCGG TTCCACCGAC GGAGGAGGAC
GGGACCTTCT CGCTCGACCT CTCCTCGTGT GGATATAAGA AGTCCTATGT GCTCCGCCGG
AGCGATGGGA CCTCGGTCTA TGCGGCCCGC GACCTCGCCT ACCATATCTG GAAGGGGAGG
AACTTCGACC GGGTGATCGA TGTGCTCGGG GCCGATCACA AACTGATCAC CGGGCAACTG
GTCTGTACGC TCCGGTTGAT CGCTGAGAAG CCGCCGGAGG TCGTTCACTT CGAGTTCGTC
TCCCTTCCGG AGGGGTCGAT GTCCACCAGG GCAGGCACCT TCGTCTCGGC TGACGAACTG
ATCGAGGAGA TGCAGAAACG GGCCATCGAA GAGGTGCAGG TGCGCAGACC CGAGATCCCG
GTTGAAGAGC GCGACGCAAT CGCGGCCTCG GTGGCGCGGG CCGCGATCAG GTACGATATC
ATCAAGGTCT CGCCTGAGAA ATCGACGGTC TTCGACTGGA AGGAGGCGCT CGACTTCGAC
CGCCAGAGCG GTCCCTACGT CCAGTACGCC CATGCCCGGG CCTGCAGCAT CCTCGATCGT
GCCGGCCCGT TCCAGGAGCG GTACGATCTG CTCGAGAGCC CGTATGAGAT CGCACTGGTG
AAGCATATCG CAAAATTCCC CTCTATCATC GAGTCCGTGG TCCGGGACCT GCGCCCGCAC
ATGCTGGCCA CCTATGCCCG GGACCTGGCC GATCTCTTCA ACACCTTCTA CCACTACGAC
CCGGTGCTGA AGGGCGAGGG GCCTGTCCGC GAGAGCCGGC TGACGCTGGT GCTGGCTGCA
GAGAAGACTC TGAAGGAAGT GCTGGAGACC CTCGGTATCG ATGCACTCAG ATCCATGTGA
 
Protein sequence
MFTETYTLIE RVLKACTDET EIALTDGGEH ADLASTVAFA LAKKRHQAPK VIAEELAVTL 
AANPELAGIR VEALGPYLNF SFGPKYLEET LKAAVQDNFG TAPTKPVRIV LEHTSANPNG
PLHVGHIRNS ILGDTLARAF RKAGYRVEVQ YYVNDMGRQI AIVAYGFDHL DTGAKPGEKA
DHHIARVYVA ANRDLEANPD KGAEIDERMQ LIEKRDPATA TQFRELVSRC LDGFKVTMQG
LNVKHDRFIW ESDFVKIGDM EKVLGRLAKI PQAVPPTEED GTFSLDLSSC GYKKSYVLRR
SDGTSVYAAR DLAYHIWKGR NFDRVIDVLG ADHKLITGQL VCTLRLIAEK PPEVVHFEFV
SLPEGSMSTR AGTFVSADEL IEEMQKRAIE EVQVRRPEIP VEERDAIAAS VARAAIRYDI
IKVSPEKSTV FDWKEALDFD RQSGPYVQYA HARACSILDR AGPFQERYDL LESPYEIALV
KHIAKFPSII ESVVRDLRPH MLATYARDLA DLFNTFYHYD PVLKGEGPVR ESRLTLVLAA
EKTLKEVLET LGIDALRSM