| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0263 |
|---|
| Symbol | |
|---|
| ID | 7270649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosphaerula palustris E1-9c |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_011832 |
|---|
| Strand | + |
|---|
| Start bp | 293573 |
|---|
| End bp | 294406 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643568914 |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_002465370 |
|---|
| Protein GI | 219850938 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.793324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.558551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGA CGTTCTTCTT TCTCGCCGCC CTGCTGCTGA CCGGCCTGCT GGTCGGGACG
GCCTCTGGCC TCTTTGGGGT CGGCGGCGGG TTCATTCTGG TCCCGATTCA GTACTGGCTG
CTGACCGCGT CCGGCCTCTC TGCTGATCTC GCCATCAGGA TCTCATTTGC AACTAGCCTG
GCAGTGATCC TCCCGACCGC TGTCAGCGGT ACCTATGCTC ACCACTGCCG AAGGTGTATC
CACTGGGACG CTGTCGTCTG GATGGGTGTC ACGGCTGCTG TGGTCTCGTA CCTCGGGGCT
CTGCTCGCCA CTCACCTCCC AGCTCGGCCG CTGGAGGTGA TCTTTGCGGT AGTGCTGATC
CTTGGTGCGT TCAGAATGTA CTTCGCCGAT CTTCCCTCCT GCGAAATAGC CTCAGTGGTC
AACAGCCGGC GCACCTATCT GCTCTGGGGG ATCCCGGTCG GATTCATATC GGGGCTGCTC
GGGATAGGCG GCGGGATCCT GATGGTCCCG GTGATGGTCG TGTTCTTAAG GTTCCCGATC
CATCATGCCA TCGGTACCTC GACCCCGATC ATCCTCTTCA CCGCTGCGGG CGGTCTCATC
TCATACATCA TCAACGGCAT TGGGGTAGCC GGCCTCCCCC CCTACTCGCT CGGGTACGTG
AATCTGATCA ACGCATTGAT CCTGGCAGTT GCGACGATTC CGATGGCCCA GGTCGGGGCC
TGGTTGGCCC ACCGGGTTTC GGGTCTCCAA CTCCGGGGTG CGCTTGTCTT CGTGATGTGC
TTCTTTGGAC TGAAGATGCT CGGTCTCTTC TCCTGGCTCG GTCTTCCGCT CTGA
|
|---|
| Protein sequence | MELTFFFLAA LLLTGLLVGT ASGLFGVGGG FILVPIQYWL LTASGLSADL AIRISFATSL
AVILPTAVSG TYAHHCRRCI HWDAVVWMGV TAAVVSYLGA LLATHLPARP LEVIFAVVLI
LGAFRMYFAD LPSCEIASVV NSRRTYLLWG IPVGFISGLL GIGGGILMVP VMVVFLRFPI
HHAIGTSTPI ILFTAAGGLI SYIINGIGVA GLPPYSLGYV NLINALILAV ATIPMAQVGA
WLAHRVSGLQ LRGALVFVMC FFGLKMLGLF SWLGLPL
|
|---|
| |