| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0214 |
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| Symbol | trpA |
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| ID | 7270599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | - |
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| Start bp | 246780 |
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| End bp | 247607 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643568866 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_002465323 |
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| Protein GI | 219850891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.688575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGGA TAGATCAGGT CTTTACTGGA CGAAATCGGC CGGCGTTCAT CGCCTTCACC
GTAGCCGGCG ACCCGGATCC AGAGACCAGC GTCAAGGTCG CCGAGGCGCT GGCCACCGCC
GGGGCCGACA TCGTCGAACT CGGGATGCCC TTCTCCGATC CGAGCGCCGA CGGCCCGGTG
ATCCAGCGAG CCGACCAGCG AGCTCTCGAA GCAGGGACCA CACCGGATAC GCTCTTCTCG
ATCATCAGGG GGATACGGGA ACGGTCGGCG GTACCGATCA TGATCCTGAC TTACTACAAC
CCGGTATTCC GGCGTGGTAT CGACCGATTC TACCGGGAAG CCGCCGATGT TGGGGCCGAC
GGGATTCTGA TCGTGGATCT CCCTGCAGAA GAGATCGGCG TGGCCCGGAC GGCGGCCGAT
CGGTACGGTC TCTGTCAGAT CGTGATGGCC ACCCCGACCA CCACCGACCG ACGACTCGAG
CTGGTCGGGT CTGCAGGGAG CGGGTTCCTG TATGTGGTCT CGGTGGCAGG TGTTACCGGA
GCCCGGGATC ACCTCGCCAC AGGAGTCGGA GATCTGCTCG AACGGATACG GAGCAGGACC
ACCCTTCCGC TAGCCGTCGG GTTTGGGATC TCGCGCCCTG AGCACATGCA GGCGATCGCT
GCAGCCGGGG GCGACGCGGC GATCGTCGGA TCTGCCATCG CATCGATCAT CGAGGAGCAT
ACTCATGATA CAGATCGAAT GATCGAGGCA CTCAGAGTCT ATGTAACCAG GATGCGGAGA
TCCCTGGAAC CCAAATTCAA AGACAGATCA AAAGAACACA TTCCATAA
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| Protein sequence | MNRIDQVFTG RNRPAFIAFT VAGDPDPETS VKVAEALATA GADIVELGMP FSDPSADGPV
IQRADQRALE AGTTPDTLFS IIRGIRERSA VPIMILTYYN PVFRRGIDRF YREAADVGAD
GILIVDLPAE EIGVARTAAD RYGLCQIVMA TPTTTDRRLE LVGSAGSGFL YVVSVAGVTG
ARDHLATGVG DLLERIRSRT TLPLAVGFGI SRPEHMQAIA AAGGDAAIVG SAIASIIEEH
THDTDRMIEA LRVYVTRMRR SLEPKFKDRS KEHIP
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