| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0198 |
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| Symbol | |
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| ID | 7270969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 230169 |
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| End bp | 232601 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643568851 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_002465308 |
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| Protein GI | 219850876 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.212278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0186793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATA TGGAACAAAA TTCACCGGGC AAAAAAGTAC TCCGAAGAAG TAATCTCTCT
CTCTTTTTCA CTATTGGGTT GACAGCCCTT TTAATATCCA CGATAATCCC CTGTGTGATG
GGTGCTTCAA CCGTAGATTT GGGATCGGCC TCCAACTTTG CAATTCTGGC AAAATCCGGA
ATCACAAACA CCGGGACGAC ACAGATCACA GGGAATATCG GAGTGAGTCC AATCGCTGCG
TCGTCTATGA CGGGATTTGG CCTCACCATG GATCCTTCGA ATCTTTTTTC GACGTCATCT
CAGGTCAATG GAAGGGTTTA TGCATCCGAT TATGCGCCGG CCACCGCATC TATGATGACT
ACATCAGTAA GCGCCATGGA AGCAGCGTAC ACTGATGCTG CCGGGCGAGT TCCCACGGTA
AACGATCTGG GAGCTGGAGA TATTGGTGGC ATGAACCTCA TTCCGGGTGT CTATCGTTGG
AGTTCTGGGG TGACAGTATC AACAGATGTC ACCCTCTCGG GCGGACCAGA TGATATATGG
ATCTTCCAGG TAGCAGGAAC TCTGGGTATC AGTTCTGGCC AGCATGTTAT CCTCAGCGGC
GGTGCACAGG CAAAGAATGT CTTCTGGGTG GTCGCAGGCC AGACGACACT GGGAACGAAC
TCTAATTTCA GTGGAAATAT TCTGGATCAA ACCGGGATTG CACTTCAAAC TGGGGCAATA
TTAAACGGCA GAGCCTTGGC CCAGACCCTG GTTACCCTAG ATTCGAATAC AGTGAATGGC
CCGATCATAC CAGTGACCAC AACACCAACA ACAATCCCAC CCACAACAGT GACACCGACA
ACAACGGTGA CGCCTACGCC GACTTCGACT GCAACGACTA CACCGACCAC AACATCAACA
ACAATCCCAC CCACAACAGT GACACCGACA ACAACGGTGA CACCTACGCC GACCTCGACT
GCAACGACTA CGCCGACTAC AACATCAACA ACTACGGTGA CACCGACTTC GACCACAGTA
CCAACGACAG CGCCTACGCC GACCTCGACT GCAACGACTA CACCGACCAC AACATCAACA
TCTACGGTGA CACCGACTTC GACCACAGTA CCAACGACAG CGCCTACGCC GACCTCAACA
TCAACAACTA CGGTGACACC GATCAATACA CCTACAACAA CACCGTCATC AAATCCAACG
ACACAGGCAA CAATAGTCCC AACCACACAG ACCAACGTCC CGGTTAAATC TACTATCACG
ACTGCAGTGC CGACACAGAC AGTGGCACCA ACCCTGACCC AGGCCCCAGT GCAGACCACG
CCAGTCGACC AGATCACCCA GCCGATCGGG ACAAATCCAA CCCCTGGGAC TGATAGTTAC
CAGCCACCAC TGGTGAAACC GATCGGTCCC CCTAGTGTGA TAACCCAGCC GATCGTCATT
ACCCAACCCG GCTATTATGT GATTGACACG GATGTTCACA ACACAACCGC CCCGATATAT
ATCGATATCC GCACCTCGAA CGTGACCATT GAAGGGAATG GTCACACCAT CGATGGTGTT
GACAGTGACA ATTCCTTTGG GATCCGGGTT CTTGGGAACG GCACACTCAC GGGGATCACC
ATCCAAAACA TCACGTTGCG CGACTTCGCC AATGGTATCA GCCTGTACGA CACAACTCAC
TCCCGGATCA TTTGGGTGAA CTCATCGAGC AACACCTATA ATGGGATTAT GATCATCGGT
GGAGGTGACA ACTATCTTGG AAACAACATC ATCCACCAGG ACGATGACGG GATCTACCTG
GCTGCGACCG ACCGGACGCT TGTGATCAAC AATACGGTAA CTGAAAATCA CCGCGGTTCA
GGGATCCACC TCTCTCAGAA CTGCCTGGAT GTGAACATGA CCGGTAATCT CCTCGAAGGG
GATGATGAAG GATTTGAGAT AGAGGATGCC GTGAACGCGA CGATTCAGCA TAACAGGATC
TCCTCGAGTA CGTATTTCGG CCTGAACCTA ACAACTGCGA AGAACCTCAC GGTCGTGGAT
AACTACCTCG ATAACAGGGT GAATGTCAAC CTCCCGAACG ACACGGTTAA TGTCATCTGG
AACCTGCCGG CCAGCACTGG AGAGAACATC ATCGGAAACA ACGTCACTGG TGGTAACTAC
TGGGGGGGGC TGGATGGAAC TGGCTTCTCA GACATCGCCG CTGACAATAA CAACGACGGG
TTCGCAGACA CCCCCTATAT CATCGGCGGC ATCGGAACCG ATCAGCTCCC TCTCGTTCGG
TTTACTCACG TTCAGATTGA GACGAATGTG ACAGATGCCC GGACAAATTC AGAACCTGTC
GTTCAGGAAC TCGACCCGAT CACTCAGGGC ACGACCACAC TCTCTTTTGG TTTGCAGAAG
GTGTATCCGA TTGGAAGTAG TTTCAGCCGT TAG
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| Protein sequence | MPNMEQNSPG KKVLRRSNLS LFFTIGLTAL LISTIIPCVM GASTVDLGSA SNFAILAKSG
ITNTGTTQIT GNIGVSPIAA SSMTGFGLTM DPSNLFSTSS QVNGRVYASD YAPATASMMT
TSVSAMEAAY TDAAGRVPTV NDLGAGDIGG MNLIPGVYRW SSGVTVSTDV TLSGGPDDIW
IFQVAGTLGI SSGQHVILSG GAQAKNVFWV VAGQTTLGTN SNFSGNILDQ TGIALQTGAI
LNGRALAQTL VTLDSNTVNG PIIPVTTTPT TIPPTTVTPT TTVTPTPTST ATTTPTTTST
TIPPTTVTPT TTVTPTPTST ATTTPTTTST TTVTPTSTTV PTTAPTPTST ATTTPTTTST
STVTPTSTTV PTTAPTPTST STTTVTPINT PTTTPSSNPT TQATIVPTTQ TNVPVKSTIT
TAVPTQTVAP TLTQAPVQTT PVDQITQPIG TNPTPGTDSY QPPLVKPIGP PSVITQPIVI
TQPGYYVIDT DVHNTTAPIY IDIRTSNVTI EGNGHTIDGV DSDNSFGIRV LGNGTLTGIT
IQNITLRDFA NGISLYDTTH SRIIWVNSSS NTYNGIMIIG GGDNYLGNNI IHQDDDGIYL
AATDRTLVIN NTVTENHRGS GIHLSQNCLD VNMTGNLLEG DDEGFEIEDA VNATIQHNRI
SSSTYFGLNL TTAKNLTVVD NYLDNRVNVN LPNDTVNVIW NLPASTGENI IGNNVTGGNY
WGGLDGTGFS DIAADNNNDG FADTPYIIGG IGTDQLPLVR FTHVQIETNV TDARTNSEPV
VQELDPITQG TTTLSFGLQK VYPIGSSFSR
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