Gene Mpal_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0173 
Symbol 
ID7270944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp200940 
End bp202145 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content60% 
IMG OID643568831 
Productglycosyl transferase group 1 
Protein accessionYP_002465288 
Protein GI219850856 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.572056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTC GACGTGCTTC TTCAGATAAG CAACTCTGCG CCCTGCAGAT CTTTCATCAG 
TACCTCGACC CATCGGAGAA CTGGGTGTAC CGGCTCCTTT CGCACTGCAC CAGAACAAGG
ATGGTGATCG GTGCAGAGAC CTACCTGCAC AACGACCTCT ATGATCCCAG GTTCACCTAC
ATCCTCTCCC CAATTCACCC GCTCAGCGTC CATCCGGGAT CGCCGATGGT GCAGTGGTTG
AACCGGTACA TTAAGAAACT GCGAGGGGTG ACCTACCCCT GGTTTCTGGA ACAGCAGGCC
AGGCACCAGG GGTGCAAACT GATCCACTCG CACTTCGCCA ATGTCGGGTG GTACTCGCTG
CCGATCGCAA AAAGGCTCCA CCTCCCACAT GTGGTCTCCT TCTACGGACT CGACTATGAG
TGGCTGCCGT TCACGCAACC GGAGTGGAGG CCACGGTACC AGGATCTGAT CGATCAGGCA
GACCTGTTCA TCTGCGAGGG AGAGCATGGG ATCGGTCTGC TCAGGGCGAT GGGGTGTCCG
GAAGAGAAGG CCACCGTGGT CCACCTTGGA GTCGAGGTGG AGACGATCCC CTGGCAGATC
CGAAAGAAGC AGGCGGGAGA GCTTCACCTG CTGCAGATCG CACGACTGAT CGAGAAGAAG
GGGCATATCG ACACGGTCAG GGCCTTTCTC AAGGCTCTCC AACACTGCCC CAATATGACA
CTGACGATAG CAGCCCCCGG CTCGGAGAAA CGCCGGCAAC GGTTGGATGC CGTGGTCCGG
AGGGCCGGGG CCGAGGATGC CGTGACGTTT CTGGACTGGG TGGACTTCGC CACCCTGCAC
CAGTTCATGC TCAGGTACCA GGTCTTCATC CATCCAAGCC GCCATGCCAG TGATCGTGAC
TGTGAGGGGG GAGCCCCGGT GGTGCTGATC GATGCAGAGG CCACCGGGAT GCCAGTGATC
GCGACCGACC ACTGCGATAT TCCGGAGGTC GTCGTGAACG ACAGGACCGG CCTGCTGACC
CCGGAGCGGG ACGTGGATCA ACTAGCCGCC TCGATCGAGC GGTTCTACTG GATGGACCAG
GACGAGTACC GGACGTTCTG CGAGCAGGCG CGGAGGCATG TGGAAGAGGA GTACAGTGCA
GCCAGGTCTG CCGAGCGGCT CGAGATGGTG TACGCCAGCC TCATTGAACA GTATATACGG
CGATAG
 
Protein sequence
MSSRRASSDK QLCALQIFHQ YLDPSENWVY RLLSHCTRTR MVIGAETYLH NDLYDPRFTY 
ILSPIHPLSV HPGSPMVQWL NRYIKKLRGV TYPWFLEQQA RHQGCKLIHS HFANVGWYSL
PIAKRLHLPH VVSFYGLDYE WLPFTQPEWR PRYQDLIDQA DLFICEGEHG IGLLRAMGCP
EEKATVVHLG VEVETIPWQI RKKQAGELHL LQIARLIEKK GHIDTVRAFL KALQHCPNMT
LTIAAPGSEK RRQRLDAVVR RAGAEDAVTF LDWVDFATLH QFMLRYQVFI HPSRHASDRD
CEGGAPVVLI DAEATGMPVI ATDHCDIPEV VVNDRTGLLT PERDVDQLAA SIERFYWMDQ
DEYRTFCEQA RRHVEEEYSA ARSAERLEMV YASLIEQYIR R