Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0164 |
Symbol | rplP0 |
ID | 7270935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 191579 |
End bp | 192433 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643568823 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_002465280 |
Protein GI | 219850848 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0624484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.630838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCACTGT ACACGCACCA CCTTCCAGAA TGGAAGCGGG AAGAGGTCGA GGATGTCAAG AAGCATATCG GGCAGTTCAC CCTTGTGGGT CTGGTCGACA TGCACGGCAT CCCGGCGACG CAGCTCCAGC AGATCCGAAG GAATCTGCGT GGAATTGCGA CGATCAAGAT GACCCGGAAC ACGCTGGTGC TCCATGCACT GGCTGAGATC GGTGGGGATC TCGAGGCAAT CAAGGATTAT ATCTCTGGCA ACAGTGCGAT GATCTTTACC AACGAGAACC CCTTCAAGCT CTACAAACTG CTGGCCAAGA CGCAGACCAA GATGGCTGCC AAGGCCGGAC AGATTGCACC TGAGGACATC GTGGTCCCCA AGGGACCGAC CTCGTTCAAG CCAGGCCCCA TCGTCGGAGA ACTGCAGCAG GCAGGGATCC CGGCAGCGAT CGAGGCAGGC AAGGTCAAGA TCAAGGAGAC CAAGACCGTC GTCAAGGCGG GCGGGGTCAT CAATGCCAAG CTCGCGACGG TGCTCGCCAA GCTCGACATC AAGCCGGTGG ATGTTGGCCT GATGTTACAG GCCGCCTTCT ATCAGGGGTC TATCTTCGAG CCGTCGACGC TGAACATCGA TGAGTCGGTC TTCATGGGTC AGATCGCACA GGCAGCCACT GAGGCATTCA ACCTGTCAGT GAACGCGGCG TTCCCGACTG CTGATACGAT CGGTGCAATC GTCACCAAGG CGGCCAGAGA GGCACGGAGC CTTGGTATCG AAGCACCGGT CTATGAGCAG GATCTGATCG ATGCGATCAT CGGAAAAGCG TACAGAGAGA TGGCAGCCGT GAAGGGCGCC ATCGGTGAAA ATTGA
|
Protein sequence | MSLYTHHLPE WKREEVEDVK KHIGQFTLVG LVDMHGIPAT QLQQIRRNLR GIATIKMTRN TLVLHALAEI GGDLEAIKDY ISGNSAMIFT NENPFKLYKL LAKTQTKMAA KAGQIAPEDI VVPKGPTSFK PGPIVGELQQ AGIPAAIEAG KVKIKETKTV VKAGGVINAK LATVLAKLDI KPVDVGLMLQ AAFYQGSIFE PSTLNIDESV FMGQIAQAAT EAFNLSVNAA FPTADTIGAI VTKAAREARS LGIEAPVYEQ DLIDAIIGKA YREMAAVKGA IGEN
|
| |