| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpal_0163 |
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| Symbol | rpl1P |
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| ID | 7270934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosphaerula palustris E1-9c |
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| Kingdom | Archaea |
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| Replicon accession | NC_011832 |
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| Strand | + |
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| Start bp | 190933 |
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| End bp | 191577 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643568822 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_002465279 |
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| Protein GI | 219850847 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.636993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGAAA GGGCAAAAAT AATTGAAGCG GTTACCGCGG CAATTGAGAA GGCGCCAGAA
CGGAAGTTCT CTGAGGGTGT AGATATCACC ATCAATCTCA AGAATATCGA TATGGCGCAG
CCGAAAAATC GTATCGATGA GACAATCCTT CTTCCACAGG GTACAGGCAG AAAAATCGAG
ATCGCGGTGC TGGGTAAGGG TGAGATCACC ACCCAGGCCA AGGAAGCAGG TGCTGACCTG
ATCATGGGTC CTGAAGAGAT TGAACGTCTC GGCGGGGAAC CCAGAGAGGC GCGAAAGATC
GCGAATCAGT ACCGGTTCTT CCTTGCAGAG ACCGCGGTGA TGCCGCTTGT GGGGCGGTGG
CTGGGCCCAA GGCTCGGTCC CCGCGGAAGG ATGCCTATGC CGATCCCACA GGGGACTGAT
ATCCGCCCGA TCGTCGAGCG GCTCAGAAAC TCTGTGAAGA TTCGGACAAA GGACAAGAAG
GTCTTCCATG CGAAGGTCGG CTCAACAGAG ATGAACAACG AGCAGATCGC CGAGAACATC
GATGCGGTCC TGAAGAGGAT CGAATCCGTG CTCGAGCAGG GTTCGTTGAA TGTCAGATCT
GTCTATGTCA AGACCTCAAT GGGTCCAGCC GTGAGGGTGG TCTGA
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| Protein sequence | MVERAKIIEA VTAAIEKAPE RKFSEGVDIT INLKNIDMAQ PKNRIDETIL LPQGTGRKIE
IAVLGKGEIT TQAKEAGADL IMGPEEIERL GGEPREARKI ANQYRFFLAE TAVMPLVGRW
LGPRLGPRGR MPMPIPQGTD IRPIVERLRN SVKIRTKDKK VFHAKVGSTE MNNEQIAENI
DAVLKRIESV LEQGSLNVRS VYVKTSMGPA VRVV
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