Gene Mpal_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0140 
Symbol 
ID7270910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp164450 
End bp165295 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID643568798 
Productaldo/keto reductase 
Protein accessionYP_002465256 
Protein GI219850824 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0208468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAA AAAATCCCAC TCCAGATCTC CCTTTTCCCG GAAAATTGCG GGTCGGGCTC 
GGGGGCGAAG GGGTACTCAG GTCAACCGGC CGGCATGCAG CCGCCCGCAC AGTGATCGAG
GCCGCCTATA GAGAGGGGAT CCGGTACTTC GACTCGGCCG TCGCCTATGC CGGGAGCCAG
GAGTATTATG GTGAGTTCTG GCGGGATCAT CAGCAGCAGC GGAACCAGTC TTTTCTGACC
AGCAAGTCGG CAGCCCGTAC CTATAGCGGG GCGATGACCG ATCTGGAACG CTCCCTCACT
GCGCTCAACA CCGACCACCT CGACCTCTGG CAGGTGCATG ATATTCGGAC AGACCATGAC
CTGCTGGAGA TGGAGAAACC CGGAGGGGCA CTCCGTGCCT TTATGGAGGC GAAGGAGACC
GGGGTCACCA GGTATATCGG GGCGACCGGT CATGCAGATC CCGGGATCCT TGCCCATGCG
GTGGAGTACT GGCCGATCGA CACGGTGCTG ATGCCGGTGA ACCCAAACGA AGTGGGGCCA
GGCGGATTCC TGGAGACGAT CATGGAGCCG GCCAGAAACC ATGGGATCCG GGTGATCGGA
ATGAAGACCC TCGGCGCCGG CCACTACCTC TTCCCAGAGG CGGGGATCAC CGCTGATGTG
CTGATCCGGT TCGCCCTCGC CCAGCAGGTG GATCAGGTGA TCGTCGGCTG CGGCACCGAA
GAGGAGGTTT TGGCACTCGT CACGGCCGGC AGGGCTGGTC CGCTTGAAAT AGAGGAAGCA
GACCGCCTGG CAGCGGTATT TCTGCCGCAT GCAGCAGCGT TCGCCTACTA CCGATCCCGG
GTCTGA
 
Protein sequence
MPKKNPTPDL PFPGKLRVGL GGEGVLRSTG RHAAARTVIE AAYREGIRYF DSAVAYAGSQ 
EYYGEFWRDH QQQRNQSFLT SKSAARTYSG AMTDLERSLT ALNTDHLDLW QVHDIRTDHD
LLEMEKPGGA LRAFMEAKET GVTRYIGATG HADPGILAHA VEYWPIDTVL MPVNPNEVGP
GGFLETIMEP ARNHGIRVIG MKTLGAGHYL FPEAGITADV LIRFALAQQV DQVIVGCGTE
EEVLALVTAG RAGPLEIEEA DRLAAVFLPH AAAFAYYRSR V