Gene Mpal_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_0115 
Symbol 
ID7272285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp136524 
End bp137237 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content59% 
IMG OID643568772 
Producthypothetical protein 
Protein accessionYP_002465231 
Protein GI219850799 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGT TCCAGACTGG CATCCCCCTG ATCGATGAAG TGGCCGGCGG TCTCCCCCAG 
GGATCGAATC TGCTGATCCT CGGTCCCCCC CTGACAGAGT TGGCCAGGAT TGGGTACCTG
CTCGCCTGTC CGCGGCCGGG CGATTATACG CTGCTGGTCA CCACCGATGA CGATTACCTG
GAGGCCCTGA CCACGTTCCG CTCGCTTGGG GCAGAGCGGG CCGCGATCGG ACTGATCGAC
ACGGTCACCC GGATCTCCAA CCCGAACATC GCTGAGGCCG ACAAGCTGAA GTTCACGGCC
AGCCCGACCG ATCTGACCTC GCTCGGGATC AAGTTTGGGA AGATGGTCGA GGCGATCTTC
GCCGGGCAGT TCCCCGATTA TGACGAAGGT CTCTTTCCAC CCCCGGTCAG GGTGATGCTC
AACTCGATCT CGACGCTGTT GATGTACCGG AAGCTCGAGG AGACCTACCA GTTCCTGCAT
ATGCTGACGA CCAGGGTGAA GAAGATGGAG GGACTTGGAC TCTATACGCT CACCTCGACC
TCCTTCGATG AGCGGACTAT CTCGGTGATC ACACAGTTGA TGACTCATAC GCTCGAAGTG
AAACGGGAGG ATGATACGAT GTCGATGCGT ATAGTTGGAC GAGGAATCAG GCAGAGCGCC
TGGATCCAGT ACCGGTACCA GGATGAAGCG ATCACCTTCC CAGGGGGGGA CTGA
 
Protein sequence
MYTFQTGIPL IDEVAGGLPQ GSNLLILGPP LTELARIGYL LACPRPGDYT LLVTTDDDYL 
EALTTFRSLG AERAAIGLID TVTRISNPNI AEADKLKFTA SPTDLTSLGI KFGKMVEAIF
AGQFPDYDEG LFPPPVRVML NSISTLLMYR KLEETYQFLH MLTTRVKKME GLGLYTLTST
SFDERTISVI TQLMTHTLEV KREDDTMSMR IVGRGIRQSA WIQYRYQDEA ITFPGGD