Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_0022 |
Symbol | |
ID | 7270134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 21872 |
End bp | 22828 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643568681 |
Product | ribonuclease HIII |
Protein accession | YP_002465141 |
Protein GI | 219850709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1039] Ribonuclease HIII |
TIGRFAM ID | [TIGR00716] ribonuclease HIII |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.094163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTAT TCCAGGCATC ACCCCCTGAC GAGTTCTACC AGGAGATCGC AACCAGACTG AATGCAGCCG GGATCCAGGC CGGACCCAGA CGGACGATCG CCTACGGGTT CCAGTTCCAG GTCAGCACCA GCGAGTGGTC GACCCTGCTC AGGGTCTACC AGAAGAAGTC CGGGGCGGTC ACGGTCGACT ACTCGCAGGT AAGAAACAGC CAGGCCGAGG CGGCCCTGAA GGCGGCGATC GCCGGCAGAG AGGTGTCGAC TCCGCAGACA GCAGATCCAT CCGGTACACT AAAGAACCTG GCCGCCCTTC CGCTGTTGAT CGGAAGCGAT GAATCGGGCA AAGGGGACTA CTTCGGACCG CTGGTCGTGG CTGCCGTCTG CCTGGATCAG CAGGGCGCCG CCAGGCTCAG GGCGGCTGGG GTGACGGACA GCAAGGCGCT CTCCGACCAG GAGAACCTGT CCCTGGCCTC CGTGGTCAGA AAGGTAGCGG TCAGCATCTC GGTGAAGGTT CTCCTCCCAG AGGAGTATAA CGCCCGGTAT GCGGCCACAG CCAGAGCCGG TGGAACATTG AACGACCTCC TCGCATCGGT CCATGCCGAA GCGATCCAGA GGGTGGCAGC AGAGAGCGGG TGCACCACAG TGCTCGTCGA CCAGTTCGCC GGGGAACGGG TACTCGACGA TCTGCTCGCC GTCCGGTACC CCGGTCTTCG GGTCGTTCAG CGACCCAGGG CAGAGCAGGA GACTCCAGTA GCGGCGGCCT CGGTGCTGGC CCGGGCACGG TTCCTTGAGG ACCTGGACCT GCTCGGCATG CCGTACAACG TCCATCTGTT AAAAGGGGCT TCTGCAGGCG TGACCAAACA GGCTGCGCAG ATGGTCGATC GATACGGCTC TGGCGTGCTC CGGACGGTGG CAAAAATTCA CTTCCGGACC ACTTCAAAGA TCTGCAGAGA CTACTGA
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Protein sequence | MSLFQASPPD EFYQEIATRL NAAGIQAGPR RTIAYGFQFQ VSTSEWSTLL RVYQKKSGAV TVDYSQVRNS QAEAALKAAI AGREVSTPQT ADPSGTLKNL AALPLLIGSD ESGKGDYFGP LVVAAVCLDQ QGAARLRAAG VTDSKALSDQ ENLSLASVVR KVAVSISVKV LLPEEYNARY AATARAGGTL NDLLASVHAE AIQRVAAESG CTTVLVDQFA GERVLDDLLA VRYPGLRVVQ RPRAEQETPV AAASVLARAR FLEDLDLLGM PYNVHLLKGA SAGVTKQAAQ MVDRYGSGVL RTVAKIHFRT TSKICRDY
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