| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3794 |
|---|
| Symbol | |
|---|
| ID | 7267868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4630039 |
|---|
| End bp | 4630944 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643568602 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_002465066 |
|---|
| Protein GI | 219850633 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00697323 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCGTA CTGTTCTCGT TCCACTCGAT GGCTCCCCGG TCGGCGAGCA AGCACTTGCT
GCCGCCGCTC GGCTGGCGCG CGCGGTGCAG GCGACCGTGC ATCTGGTACA TGTCCATTAC
CCTAATTCTC TGACGCCAAT CGTGATCGAG ACGTTACCGG TCATCGATAC CGATCTGCAT
TCGTTGGCGG CTGAGCACGA ACGATTTTAT CTGGAACAAA CCGCTCAATC CCCCCTCTTG
CATGGGTTAG ACGTTGTGAC CACACGCCTT GAGGGTCCGG TCGCTGAAAC ATTGGCTGCG
TATGCTCAAA CCATCCCGGC TAACATGATC GTCATGACGA CACACGGTTG GAGTGGGTTT
GAATACTTCT GGCTGGGAAG CGTGACTGAG GCCCTGTTGC GGCTAACCCA TACACCACTC
TGGATCATGC GACCGGGCGA ATCGGCCCAA CGGGCTGCTC AACCGCTGCA ACGTATCCTT
GTCCCGCTTG ATGGTTCGCC ACTTGCCGAG AAGATTCTGC CGGTGGTGCA AGCCTTAGCC
GCACTCGACA ATGCACGCCT GATCTTAGCC CGCGTCATTG ATGGCCGTCG CTCACCTCCG
AACTCCAGCA TCGACAATCA GCACGTCGAA GCTTATTTAC AGGCAGTGGC AACTCGGCTT
GAAGCCCAAG GCTTCCTTAC CGACATTGCC GTCGGTACCG GCGACCAACC GGCACGCGCG
TTGCTCAACC TCAGTCGTGA GCTAAACGTT GACACAATTG CCCTCGCCAC ACGTGGGCAA
GGTGGTTGGC AACGGTTGAT GGTGGGAAGT ACTGCCGATA AGCTGATTCG GGGTAGCCCG
ATACCGGTGC TGGCGATGTA TCCATCATCT CACGAAACGT CTACTGACCG GCACGGAGAT
GGATGA
|
|---|
| Protein sequence | MFRTVLVPLD GSPVGEQALA AAARLARAVQ ATVHLVHVHY PNSLTPIVIE TLPVIDTDLH
SLAAEHERFY LEQTAQSPLL HGLDVVTTRL EGPVAETLAA YAQTIPANMI VMTTHGWSGF
EYFWLGSVTE ALLRLTHTPL WIMRPGESAQ RAAQPLQRIL VPLDGSPLAE KILPVVQALA
ALDNARLILA RVIDGRRSPP NSSIDNQHVE AYLQAVATRL EAQGFLTDIA VGTGDQPARA
LLNLSRELNV DTIALATRGQ GGWQRLMVGS TADKLIRGSP IPVLAMYPSS HETSTDRHGD
G
|
|---|
| |