Gene Cagg_3714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3714 
Symbol 
ID7268250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4513650 
End bp4514351 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content60% 
IMG OID643568521 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_002464986 
Protein GI219850553 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.349648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000325889 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTCGT TTTGGTCACG CCTCTTTCAG CGCACGCCTC CTGCCGATTT TGTGCGGGCC 
TACGAAGCCT TCCCTGCGCC TGACCGGCGC TTGCCGTGGC GGGAAGTGCC GTACACGGTG
ATTGATGTTG AAACCACCGG CCTCGATCCG CGCCACGATG CGCTGATTGC GATTGGCGCC
GTTAATGTTG AGAATGGGCG CGTCTTGTTG AAACAGACAT GGCATTCGCT CATTCGCCCG
CCACCTGGTC GCGAGCCAAG CGTTGAGAGC ATTCGCGTCC ATCACCTCAC CCCGGAAGAG
TTGCGCGATG CACCACCACC TGCTGAGGTG TTGGCCGAGT TGTTGCGTCT TATTGCCGGG
CGGGTGTTGG TGGTGCATGT GGCCGAAATT GATGTGCGCT TCATCAATGC TGCACTCAAG
CCGTTTGGTG GGCGCTTGCG CCGGCCGATC CTCGATACGG CACGTTTGGC GATGACTTTG
CACCTCAATG CGCAGTGGTT GGGTGAACTG CCGCGTGATA TGCCGGCGCC GGCGGTTGAG
TTGCGTGGCT TGACCGGCGC GCTAGGCTTG CCGATCTATG CCCAACACAA TGCGCTCAAC
GACGCGGTGA CCACTGCCCA GTTGTTTATT GCCCAAGCGA CGTTGCTGGC CGATCAGGGG
CGTAATAATT TGGCCGGTTT GATTCGGGCC GGGGGGGTCT AA
 
Protein sequence
MLSFWSRLFQ RTPPADFVRA YEAFPAPDRR LPWREVPYTV IDVETTGLDP RHDALIAIGA 
VNVENGRVLL KQTWHSLIRP PPGREPSVES IRVHHLTPEE LRDAPPPAEV LAELLRLIAG
RVLVVHVAEI DVRFINAALK PFGGRLRRPI LDTARLAMTL HLNAQWLGEL PRDMPAPAVE
LRGLTGALGL PIYAQHNALN DAVTTAQLFI AQATLLADQG RNNLAGLIRA GGV