Gene Cagg_3708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3708 
Symbol 
ID7268244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4506814 
End bp4507878 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content57% 
IMG OID643568515 
ProductRadical SAM domain protein 
Protein accessionYP_002464980 
Protein GI219850547 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000832138 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000507033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTACT ATCAACGCGA AATTGCTCCG AACGTACCGC CGCTTAGCCC ACGCCGTCCG 
CTCATCAACG AGTACTTTCT CTCGGCCTAC ACGATGAGCA TCTATGCCGG CTGTGAGTTT
GGCTGCCCGT ATTGTGACAG TTGGGTCTAT CACGAACGAC CGCTCAACGA GACGATTGCC
ATCCCGGTCG ACTTACCGCA GCGCCTTGCT GCCGTCCTAC CGACGATTGA TCGTGGAGAT
TTGATCGCCA TCAGTGCCTT GAGCGATCCC TATCAGCCCG CCGAAGAGAC GTATCGTATC
ACGCGGCAGG TGTTGCAACT CTTTGCCGAG CATCGTCAGC CTTGTCTGGT GATGACGAAG
AGTCCGCTCG TGCTTGAAGA TCGTTCACTG TTACAGAAGA TCAACGAGCA GAGTTTGGCA
ATCGTGGTTA CGACGCTACT CACGCTCGAT CAGCATTTGG CGACCCGCAT CGAGGCTCGT
GCGCCGTCGC CCCAGTTACG CCTTGAACTG ATTACCGAAT TGAAACGGGC CGGGATTCCG
GTTGGGGTAG CGTTGGTGCC GATTATGCCC TACGTCAACG ATAGCAATCT CAATCTGCGC
CGTGTATTGC ACGCTTGCGC AACTGCCGGC GCCGATTTTG TGATTTGGGA TTACCTACAC
ATCCCGAACG AGCGCCATCG GCATCGGATC AACGTATTAC TGAACCGGCT TGGTTCCTAC
CCGCCGCGTT ACTACCGTGA TATCTATCGC GATCAGGCAA CGGTCAATCC GCTCTACCGG
TACGATCGCG ACTACGAATT ACTTCAGCGC TGCGACGAGC TGGGTTTAGC ACCGCGCGCC
CCGCATCATC TCTTTGCCGG CAAGTTATCA CCGCGTAACG AAGCTGCTTT GCTCTTGCGT
CATACGGCTT TTCGTGATCG CGTACAGGGG CGTGATCGAT TAGCGACGCT CCACCGTGAA
CTGGCCGACG CCGTCTACCG AGGCCGTATT CGGGCTGCCG ATCTCCGGCA AAGCCCGCTC
TACCCCACCA TTGGCCCGCT CCTGGGATTA TCGGCCACCG GCTGA
 
Protein sequence
MAYYQREIAP NVPPLSPRRP LINEYFLSAY TMSIYAGCEF GCPYCDSWVY HERPLNETIA 
IPVDLPQRLA AVLPTIDRGD LIAISALSDP YQPAEETYRI TRQVLQLFAE HRQPCLVMTK
SPLVLEDRSL LQKINEQSLA IVVTTLLTLD QHLATRIEAR APSPQLRLEL ITELKRAGIP
VGVALVPIMP YVNDSNLNLR RVLHACATAG ADFVIWDYLH IPNERHRHRI NVLLNRLGSY
PPRYYRDIYR DQATVNPLYR YDRDYELLQR CDELGLAPRA PHHLFAGKLS PRNEAALLLR
HTAFRDRVQG RDRLATLHRE LADAVYRGRI RAADLRQSPL YPTIGPLLGL SATG