Gene Cagg_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3681 
SymbolinfB 
ID7268216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4473144 
End bp4475405 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content57% 
IMG OID643568487 
Producttranslation initiation factor IF-2 
Protein accessionYP_002464953 
Protein GI219850520 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00576781 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA AGCCACGACG AGATACAGGC GGTACGGGAA CGGGTAGCGG GCGTAGCACC 
GGCCAATCGA CGAATCGCAC AAGCAATCAA CAGACAGGAA CGGGGCGTAC TCCAACTGCT
ACCGGTGCTC ATCGGCAGCC GGCCAATCAA TCGACCGGTG GTGGGCGTTC GTCGTCCACC
GGCGGACGCA ATACACCGAC CAACCAAGGA AATGCGCGAC CGGCAGCACC GGCAAATGCC
CGGAGTGGCA ACCAACCCGC TCGTGGTAAT AATGCGCCGG CTGCGTCGCG GAGTGGCGGC
AGTACGCCGG CTCCGGTGCG CGGCGGTGGT GCGACACCGG CCCCGGCTCG CGGTACGAAT
ACCCGTAATG CTCGCTCACA ACAATCCCGT GGCCGTCCTC AACCTGAAGA ACGTGAACGC
GAACGCGAGG CCGTGTTGCG CCGTCCGCCC ACCCCAACGA CGACCCGCCC GGTGATGCGT
CCGCGCGGCC CGGTTGCATT ACCTCCGGTC ATGACGGTGC GCGAGTTGTC GGAAGCGACC
GGTATTGGCG CTGCCGATAT TTTGAAGACC ATGCTCAAAG CGGGCATGAT TGCCAATATC
AATCAGCAAA TCGATTATGA GACGGCTGCC CTTATCATGA CCGATTTTGG GATTGAAACG
GTCGAAAATA TGCCTGAACA AATGGTTGGG ATCGTTGAAG ACGTTAAAGA GGTACTACGA
TCCCAACCAC CGGAAGAGAT GCGCCCTCGC CCACCCGTCG TTACGATTAT GGGTCACGTT
GACCACGGAA AGACCAAGTT GCTTGATGCA ATTCGCTCGA CACGGGTAGC AGAAGGCGAG
GCCGGTGGGA TCACCCAACA TATCGGTGCG TATCAGGTTG AGGTGAATCA CCGGAAGATT
ACCTTCCTCG ATACACCCGG CCACGAGGCG TTTACCGCCA TGCGCGCGCG CGGTGCCCAA
GTTACCGATA TCGTTGTCTT GGTGGTCGCC GCCGATGATG GTGTCAAACC ACAAACTGAA
GAAGCCATTG CTCACGTCAA AGCGGCCGGT GTGCCGATGA TTGTGGCAAT TAATAAGATT
GATTTGCCAA CGGCGAATCC CGATCGGATC AAGCAACAGT TGGCCGCACT GGACGTGATT
GTCGAAGAGT ACGGTGGTAA TGTGCCGTGC GTGCATGTTT CGGCTCGCCA GAAAATTAAT
ATTGACGGGT TGCTGGAAAT GATCTTGTTG GTAGCCGACC TCGAGGATCT GCGCGCAAAT
CCCAATGCGC CGGCCGTCGG TACGATTATC GAGGCCAAAC TCGATAAGAG TCGTGGTCCG
GTAGCAACGG TGTTGATCCA AAACGGTACG CTCCACCTCG AAGATAACGT GTTGGTCGGC
TGTGTCGCCG GCAAGATCAA ATCAATGTTT AGCGACAGCG GGAAGCGCCT TCGCCACGCC
GAACCGTCAA CCCCCGTGGA AATTATCGGG TTGGAAGGTG TGCCACAGGC CGGTGACATC
TTGCAGGTGA TGGACGATCT GGTTCTGGCA CGTGAGATCG CATTGCAACG CCAACGCCAG
CAGCGGGCCG AAGCGATGGC AGCGAGCGCG CGCGGTACCA GCCTCGAAGA GCTGTTCGGT
AAGGTGAAAC AGGGTCAGGT GAAGGAGTTG AACCTGATCT TGAAAGCCGA TGTCCAGGGC
TCACTCGATG CGATTGCCCA TCTGATCGAG CAGTTGAACC AGTCGCAGAA CGAGGTGCAA
ACCCGCATCA TTCACCGTGG TGTCGGTGCC ATTACTGAAG GTGATGTGAA CCTTGCCCTC
GCCAGCCATG CAATTATCAT CGGCTTCAAC GCTCGGCCAG ACCCGGCGGC CCGCCGTCAC
GCCGAACAGC ATGGGATTGA TATTCGCTTC TACAACATCA TCTATCAGTT GCAAGATGAT
TTGAAGAAGG CAATGGCCGG TATGCTCGCA CCAACCTTCA AAGAGGTGGT CGAGGGCTAT
GCCGAGGTCC GCAATATCTT CCGCTTACCT ACCCGTGAGG TGGTCGCCGG TGTGTATGTC
ACCGACGGTA AGATTACACG CACCGGCCAA AATGTCCGCG TGTTGCGACG CGGTGTGGTG
ATCCACGACG GCAAGATCTC GTCGCTCAAG CGATTTAAAG ATGATGTGCG CGAGGTGACG
GCCGGTTATG AGTGCGGTTT GATCGTCGAG GGCTTTAACG ATATTGAAAT CGGTGATGCG
CTCGAGTTCT ATCGCCAAGA GCAGGTAGCA GCCACACTGT GA
 
Protein sequence
MSEKPRRDTG GTGTGSGRST GQSTNRTSNQ QTGTGRTPTA TGAHRQPANQ STGGGRSSST 
GGRNTPTNQG NARPAAPANA RSGNQPARGN NAPAASRSGG STPAPVRGGG ATPAPARGTN
TRNARSQQSR GRPQPEERER EREAVLRRPP TPTTTRPVMR PRGPVALPPV MTVRELSEAT
GIGAADILKT MLKAGMIANI NQQIDYETAA LIMTDFGIET VENMPEQMVG IVEDVKEVLR
SQPPEEMRPR PPVVTIMGHV DHGKTKLLDA IRSTRVAEGE AGGITQHIGA YQVEVNHRKI
TFLDTPGHEA FTAMRARGAQ VTDIVVLVVA ADDGVKPQTE EAIAHVKAAG VPMIVAINKI
DLPTANPDRI KQQLAALDVI VEEYGGNVPC VHVSARQKIN IDGLLEMILL VADLEDLRAN
PNAPAVGTII EAKLDKSRGP VATVLIQNGT LHLEDNVLVG CVAGKIKSMF SDSGKRLRHA
EPSTPVEIIG LEGVPQAGDI LQVMDDLVLA REIALQRQRQ QRAEAMAASA RGTSLEELFG
KVKQGQVKEL NLILKADVQG SLDAIAHLIE QLNQSQNEVQ TRIIHRGVGA ITEGDVNLAL
ASHAIIIGFN ARPDPAARRH AEQHGIDIRF YNIIYQLQDD LKKAMAGMLA PTFKEVVEGY
AEVRNIFRLP TREVVAGVYV TDGKITRTGQ NVRVLRRGVV IHDGKISSLK RFKDDVREVT
AGYECGLIVE GFNDIEIGDA LEFYRQEQVA ATL