| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3600 |
|---|
| Symbol | |
|---|
| ID | 7269744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 4376283 |
|---|
| End bp | 4377281 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643568408 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_002464874 |
|---|
| Protein GI | 219850441 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.177438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCT GTGTCATTCC CGGTGATGGG ATCGGTTCTG AAGTAATGGC TGCGGCAACG
GCGGTGTTGC GCGTGTTGGC ACCAGACCTC ACCCTCTGTG AAGCCGAGGC GGGGTGGGGC
GTCTTCCAGC GCACCGGCGT CGCCCTTCCC GCCGAAACAC TCGCAGCAGC GCGTGAGGCG
ACTGCTATTC TCTTCGGCGC AGTTGCCTCA CCGAGCCACC CGGTGCCCGG ATACCGTAGT
CCGATTGTCG AATTGCGCCG TACCCTTGAT CTCTACGCCA ACATTAGGCC AACGATTGGC
CCCGGCGTTG ATCTGGTTGT GGTACGCGAG AATACCGAAG ATTTGTACAG TGGGCGTGAA
CGGCTCGAAG ACGACGGTAA CACAGCAATT GCCGAGCGGG TGATTACGCG CACCGCTTCG
GCCCGAATTG TGCGTACCGC CTGCGAACTG GCGCGCACCC GCCAAGCCGC CGGCCGTCCC
GGCAAGATCA CGATTGTTCA TAAAGCTAAC GTGCTGCGGG TCAGTGACGG CCTCTTCCGT
ACCGTAGCGC TAGAGGTCGC TGCCGACTTC CCCGAATTGA CCTTTGAAGA GCGGTTGGTT
GACGTGGCCG CGATGCAACT CGCCGCCCAA CCGCAACGGT TTGATGTGAT CGTTACCACT
AACATGTTCG GTGATATTCT GTCGGATATT GCCTGCATTC ACGGCGGTGG TTTAGGCGTA
GCGGCCAGCA GCAATCTCGG CCATGGCCGC GCACTGTTTG AACCGGTGCA TGGTGCCGCA
CCCGATATTG CCGGGCGCGG GATTGCCAAC CCAACCGCCG CTCTCAACTG TGTGGTGATG
CTGCTTGAGT GGATCGACCG GACTCACACA GCCGAACGGC TCCGCCGCGC GATGGACGCC
GTCGCTAGCG AAGGAATTCG CACACCGGAT GTTGGCGGTG ATGCGACAAC ACGTGAAGTA
ACTGAAGCCA TTCTTGAACA GATAGCAACA CAAGCCTGA
|
|---|
| Protein sequence | MQICVIPGDG IGSEVMAAAT AVLRVLAPDL TLCEAEAGWG VFQRTGVALP AETLAAAREA
TAILFGAVAS PSHPVPGYRS PIVELRRTLD LYANIRPTIG PGVDLVVVRE NTEDLYSGRE
RLEDDGNTAI AERVITRTAS ARIVRTACEL ARTRQAAGRP GKITIVHKAN VLRVSDGLFR
TVALEVAADF PELTFEERLV DVAAMQLAAQ PQRFDVIVTT NMFGDILSDI ACIHGGGLGV
AASSNLGHGR ALFEPVHGAA PDIAGRGIAN PTAALNCVVM LLEWIDRTHT AERLRRAMDA
VASEGIRTPD VGGDATTREV TEAILEQIAT QA
|
|---|
| |