Gene Cagg_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3556 
Symbol 
ID7266484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4319242 
End bp4320342 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content55% 
IMG OID643568363 
ProductABC-3 protein 
Protein accessionYP_002464830 
Protein GI219850397 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAC AACTTGAAGT GCAATTGATT GCCGTGGTGA TTGCGGTAGC CTGTGCCTTA 
CCCGGCGTGT TTCTGGTTTT GCGCCGCATG GCAATGCTGA GTGATGCGAT AAGTCATACC
GTATTGCTCG GGATTGTTCT GGGTTATTTG ATCAGTAACA ACCTCGCCTC ACCGTTGCTC
TTCGCAGGTG CCGTTGTCAT GGGCGTGATC ACGGTCTGGC TGGTCGAACT GGTCAGTGGC
AGTCAGTTGG TACGAGAAGA CGCAGCCATT GGGTTGGTCT TTCCAATGCT CTTTAGCCTG
GCGGTACTCC TCATTTCACG TTACGCCGGT ACGATCCACC TCGATACCGA CAGTGTGTTA
CTGGGTGAAC TGGCATTTGC GCCGTTCGAC CGGATCGATC TGTTGGGAAT CGATCTGCCA
CGTGCCCTCG TGACCGGAAG TGGTACGTTG TTGTTGAATG TAGTGCTGCT TATCCTCTTT
TATAAAGAGT TGAAATTGGC AACCTTCGAT CCGGCGTTTG CGGCAACCCT CGGTTTTGCG
CCTCACATTA TTCACTATGG TTTGATGACG AGTGTCTCAC TGACGGCAAT GGCGGCGTTT
GACGCGGTTG GGTCGATTCT GGTGATTGCG TTGATGGTGG CACCGCCGGC GACTGCCTAT
CTCCTGACCA ATCGATTACC GCGGATGCTC GGGTTGAGTG TGATACTCGG CGTTGTGGCC
GCGATAAGTG GTTACTGGCT GGCACGTTGG CTCGATGTTT CGATTGCCGG GGCGATGGCA
ACGATGACCG GAATCATCTT TGGCCTCGCA TGGTTGTTTG CCCCGCAACG GGGGCTGGTG
GCGCAGGTCT GGCAACAACG CCGACGCCGT GAGCAATTCG CTTTGCAACT ATTGACCCTC
CACCTGTTCA ACCACGAGGG GTCGGGTAAG GAACGGATCG AATGCCATCC CGATCACCTG
ATCACCGAGC TACGCTGGTC ACCGACCTTT GTGCGCACAG TTGTTCGTCG GGCCGAGCAG
ATTGGATTGA TCCGGCGTCA AGGGAGTGTG CTGTCCCTTA CCGAACAAGG TCGGCGGTTT
GCGCAGAGTG TTGAGGTTTG A
 
Protein sequence
MTPQLEVQLI AVVIAVACAL PGVFLVLRRM AMLSDAISHT VLLGIVLGYL ISNNLASPLL 
FAGAVVMGVI TVWLVELVSG SQLVREDAAI GLVFPMLFSL AVLLISRYAG TIHLDTDSVL
LGELAFAPFD RIDLLGIDLP RALVTGSGTL LLNVVLLILF YKELKLATFD PAFAATLGFA
PHIIHYGLMT SVSLTAMAAF DAVGSILVIA LMVAPPATAY LLTNRLPRML GLSVILGVVA
AISGYWLARW LDVSIAGAMA TMTGIIFGLA WLFAPQRGLV AQVWQQRRRR EQFALQLLTL
HLFNHEGSGK ERIECHPDHL ITELRWSPTF VRTVVRRAEQ IGLIRRQGSV LSLTEQGRRF
AQSVEV