Gene Cagg_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3481 
Symbol 
ID7269707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4245248 
End bp4246525 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content56% 
IMG OID643568290 
Productlight-independent protochlorophyllide reductase subunit N 
Protein accessionYP_002464757 
Protein GI219850324 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01279] light-independent protochlorophyllide reductase, N subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGG CGAGCACCAT CCGAGAGGAT GGACTATACC ACTCATTCTG CGGTCTCGTA 
AGCGTCGGAT GGCTCTACCA GAAGATCAAA GACAGCTTTT TCCTCATTCT CGGTACCCAT
ACCTGCGCCC ACCTACTCCA AAACACGCTC GGAGTGATGA TCTTCGCCCG TCCACGCTTT
GCCGTATCGC TCCTCGAAGA ATCGGATCTC AGCTCGTCGC AGCCCGACAT TTCGGCTCAG
ATCGAAGAGA TTAAGCGCGA GCACCACCCT TCTGTGATCT TCCTCCTTTC ATCGTGTACG
CCTGAAGTGA TGAAGGTGGA ATTTGAAGGT CTCGCAGCGT CGGTTAGTAC ACCTGAAGTG
CCGGTGCTAT TTGTGCCCGC TTCCGGTCTC GACTACACCT TTTCACAAAG CGAAGACTCG
GTATTGCAAG CGCTCATCCC CTTCTGTCCG CCTGCCCCGC CCGAAGATAA GCGCGTCGTC
TTCCTCGGTT CGGTCAACGA TGCGATTGCC GACGACTTTT CTCTCGAAGC AGCCCGTCTC
GGTATTCCGG TTGCCGGTTT CTTGCCCGCC AGCCATTTCC ACGAATTGCC ACCCATCGGG
CCGGGAACGA TTGTGGCGCC ACTCCAGCCC TATCTCCACA AGACGGCCAC TCAATTGCGC
AACGAGCGCG GTTGTACGAT CCTCTCATCG CTCTTCCCAC TTGGCCCTGA CGGCACACGC
CGTTTCTGGG AGGATTTGGC CGCCCATTTC GATATTAAGG TCGATCTGAG TGATCGCGAA
GCTGCCGCAT GGGAGCGGAT TAAACGCCAT ACCGATCTCC TACGCGGTAA GAAGATCTTT
TTTGCCAGTG ATACCTTAAT GGAATTGCCG TTGGCCCGCT TCCTCAAAGC CTGCGGCGCT
GAAGTGGTCG AGTGCTCGAC CCCGTACATC AACCGTCGCT TCCACGCTGC CGAACTCGCT
GCGCTCGAAG GAGTACGGCT GGTTGAACAG GCCAATTTCC ACCGCCAGTT GCAAACTATT
GCCGAAACAA AGCCCGATCT GATTATCTCT AACATTATTA CCACCAACCC ACTGGTCGGT
CAGGGAACGG TCGCGAAGTG GGGGACAGAG TATTGCTTCC TGCCTATTCA CGGCTGGGCC
GGCGTGAATG CATTAGTTAC GTCGTTCACG CGCGCGCTCG AACGTCACGC GAAGCTTGAC
CCACTTGGTT CCGACCCGAT TTGGTTGACC GGGATTATGC CAGGCGCTCC CGGCGGCGTC
ATTTCGTTGC AATCGTAG
 
Protein sequence
MHKASTIRED GLYHSFCGLV SVGWLYQKIK DSFFLILGTH TCAHLLQNTL GVMIFARPRF 
AVSLLEESDL SSSQPDISAQ IEEIKREHHP SVIFLLSSCT PEVMKVEFEG LAASVSTPEV
PVLFVPASGL DYTFSQSEDS VLQALIPFCP PAPPEDKRVV FLGSVNDAIA DDFSLEAARL
GIPVAGFLPA SHFHELPPIG PGTIVAPLQP YLHKTATQLR NERGCTILSS LFPLGPDGTR
RFWEDLAAHF DIKVDLSDRE AAAWERIKRH TDLLRGKKIF FASDTLMELP LARFLKACGA
EVVECSTPYI NRRFHAAELA ALEGVRLVEQ ANFHRQLQTI AETKPDLIIS NIITTNPLVG
QGTVAKWGTE YCFLPIHGWA GVNALVTSFT RALERHAKLD PLGSDPIWLT GIMPGAPGGV
ISLQS