| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3438 |
|---|
| Symbol | |
|---|
| ID | 7269663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4177124 |
|---|
| End bp | 4178548 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643568248 |
|---|
| Product | tyrosine phenol-lyase |
|---|
| Protein accession | YP_002464716 |
|---|
| Protein GI | 219850283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3033] Tryptophanase |
|---|
| TIGRFAM ID | [TIGR02618] tyrosine phenol-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00561885 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.374113 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATGG AACCAGACTT CCCACGCACG ATGGGTCAGC AGTTTGGCCG CCGGTCGTGG
GCCGAGCCGT GGAAGATCAA GACGGTCGAG CCGCTGCGGA TCATTAGCCG GGCCGAGCGC
GCGGCAGCGC TGAAAGCCGC CGGCTACAAC ACCTTTTTAC TCCGTTCGGA AGATGTTTAT
ATCGATCTGC TCACCGATAG CGGCACCAAT GCTATGAGCG ACCGGCAGTG GGCAGCGTTG
ATGATGGGTG ACGAGGCGTA TGCCGGTAGC CGCAGTTTCT ATCGGTTGGA AGCGGCAGTG
CAGCAGGCTT ACGGCTATCG TCATGTCATT CCCACCCACC AAGGCCGTGG CGCCGAGCAT
CTGATCAGCC GGATCGCTAT TCAACCCGGT CAGTATGTGC CCGGTAATAT GTATTTCACT
ACTACCCGTC TCCACCAAGA ACTCGCCGGT GGCATATTTG TTGATGTGAT TATCGATGAA
GCTCACGATC CGCAGAGCCA ATATCCCTTC AAGGGGAATG TCGATCTCGA TAAGCTGCAA
ACGCTGATCA ATCAAGTTGG CGCAAAACAG ATTGCCTACG TCAGCCTCGC CGGTACGGTC
AATATGGCCG GCGGCCAGCC GGTCAGTATG GCGAACGTGC GCGCTTTGCG CGAATTGTGC
GACCGCTACG GCATCCGCAT TTTTCTCGAC GCGACCCGGT TGGTTGAGAA TGCCTTCTTC
ATCAAAGAGC GCGAACCCGG CTACGCGAAT CATACTATCG CCGAAATCGT GCGCGAGTTT
TGTAGCTATA CCGACGGTGC GTGGATGAGC GCCAAAAAGG ATAGTCTGGT CAACATCGGG
GGCTGGCTGG CGCTGAACGA CGATCAGCTT GCCGATGAGG CGCGCAATCT GGTGGTGGTG
TACGAGGGGT TGCATACCTA CGGCGGGATG GCCGGGCGCG ATATGGAAGC ATTGGCAGTT
GGAATTGAGG AATCATTACA AGAGGACTAC ATTCGGGCGC GAATCGGCCA AGTGCGCTAC
CTTGGCGAAC TGCTGCTCGA TTGGAATATC CCGATTGTCG TGCCGATCGG TGGGCACGCG
ATTTTCCTCG ATGCTCGCCG TTTCTACCCA CACCTCCCCC AAGACCTCTT CCCTGCCCAA
ACTTTAGCCG CTGAGCTGTA CCTCGATTCG GGGGTACGGG CAATGGAACG TGGTATCGCC
AGTGCCGGAC GCGATCCTAA GACCGGGCAG CACCACTATC CCAAACTCGA ACTGACCCGC
CTCACCATCC CACGCCGAGT CTATACCCAA GCCCACATGG ACGTAGTTGC CGAATCGGTG
AAGTCGGTCT ATGACCAACG TGAACGCGCC CGTGGGCTGC GTATGGTTTA TGAGCCGCGT
TACCTGCGCT TCTTCCAAGC CCGCTTTGAA CCGGTTACGG AGTGA
|
|---|
| Protein sequence | MEMEPDFPRT MGQQFGRRSW AEPWKIKTVE PLRIISRAER AAALKAAGYN TFLLRSEDVY
IDLLTDSGTN AMSDRQWAAL MMGDEAYAGS RSFYRLEAAV QQAYGYRHVI PTHQGRGAEH
LISRIAIQPG QYVPGNMYFT TTRLHQELAG GIFVDVIIDE AHDPQSQYPF KGNVDLDKLQ
TLINQVGAKQ IAYVSLAGTV NMAGGQPVSM ANVRALRELC DRYGIRIFLD ATRLVENAFF
IKEREPGYAN HTIAEIVREF CSYTDGAWMS AKKDSLVNIG GWLALNDDQL ADEARNLVVV
YEGLHTYGGM AGRDMEALAV GIEESLQEDY IRARIGQVRY LGELLLDWNI PIVVPIGGHA
IFLDARRFYP HLPQDLFPAQ TLAAELYLDS GVRAMERGIA SAGRDPKTGQ HHYPKLELTR
LTIPRRVYTQ AHMDVVAESV KSVYDQRERA RGLRMVYEPR YLRFFQARFE PVTE
|
|---|
| |