Gene Cagg_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3328 
Symbol 
ID7267068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4038402 
End bp4039220 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID643568140 
Productpolymorphic outer membrane protein 
Protein accessionYP_002464611 
Protein GI219850178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000184033 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACGCCC GTCGTGTGAT TCTGCTGCTG CTGCTCCCCA TCCTCCTGCC CCCCATCCTC 
CTGCCGACGT CGGTGCTCCC ATCGGCAGCG GGGCAGACCT ATACCGTCAC AACCCTCGCC
GATACCGTTG CGCCTGACGG CTCCTGTTCC CTGCGGGAAG CCATCTTGGA GGCGCAACAC
GAAACGGACA CCGATTGCCC CGGTTCGCCG AGCAATGCCG ATGACACGAT TACGATTGCC
GTCTCAGGCA CCATCGTGTT GTCCGAACCC CTCCCCGATA TTATCGGGCG ACGATTTGTC
ATTACGCCGG ATCGGGTCGA CGAATTCCGG TTCGGTGCAT TGACCATCCG GGGCAACCCC
ACCCTGACCA TCAGCGGCGA TGGCCGCCAC CGCATCATTA CCGTCAAGGA CGCCGGATCG
CTGACCCTCG ATACGCTCAC CCTCACCGAT GCCGTTGCCC CCGACCCCGG TGGTGCCATC
CGTATCATCA ATGCCGACCA GGTGACGATT ACCAACAGTC GCGTGACCAA CAGTACCGCA
CCCCGCGGTG GTGCGATCTC CGCGAGCAAC ACCCGCGTGA CCGTCGAACG TTCGGTAGTT
GCCGAGAATC GGGCCTCCGA TCGCGGCGGT GCGATTGACG TTTTCGCAGG GCAGCTCATC
ATCCGCGATT CCGAGCTGTC CCGGAACACG GCAGAGTATT CCGGCGGGGG GGCGTTTCCC
TCACAAGCGT GCAGGAGGCC GTCATTGTGC AGACGGTCTT TACCGAGAAC GAGGCCAAGA
CCGCCGACAG CTCAGGCGGA CAAGGGGGGG CGATCCTGA
 
Protein sequence
MDARRVILLL LLPILLPPIL LPTSVLPSAA GQTYTVTTLA DTVAPDGSCS LREAILEAQH 
ETDTDCPGSP SNADDTITIA VSGTIVLSEP LPDIIGRRFV ITPDRVDEFR FGALTIRGNP
TLTISGDGRH RIITVKDAGS LTLDTLTLTD AVAPDPGGAI RIINADQVTI TNSRVTNSTA
PRGGAISASN TRVTVERSVV AENRASDRGG AIDVFAGQLI IRDSELSRNT AEYSGGGAFP
SQACRRPSLC RRSLPRTRPR PPTAQADKGG RS