Gene Cagg_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3247 
Symbol 
ID7267394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3936060 
End bp3936860 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content58% 
IMG OID643568068 
Productglutamate racemase 
Protein accessionYP_002464541 
Protein GI219850108 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGCA TTTTCGATTC CGGTCTCGGT GGACTAACGG TAACACGGGC TATCCATGAA 
CGATTGCCAA CCGCCGATCT CCTTTATCTG GCCGACAGCG CCTATTGCCC GTATGGTCCA
CGTCCGGTTG AGGAAATTCG TGCGCGTGCT CTCGCCTGTG GACAATGGCT GGTCGAACAG
GGCGCACAGA TCGTGGTGGT CGCTTGCAAT ACAGCGACGG CCGCCGCGAT TGAAGTGTTG
CGCAGTACGT TGCCGGTGCC GGTAGTAGGG ATGGAACCGG GCGTCAAACC CGCAGTCGCT
GCTACTCGCC GTGGCAAAGT GGCCGTGATG GCGACCAGCG GCACCTTAGC TAGCGACCGC
TTTCGTGCAT TGATTAATGC CTATGCCGCT GAGGTCGAGG TTTATGCGCT GGCTTGCCCT
GATTTAGTCG AGCAAGTTGA GGCCGGTGCG ATTGCTGATG AATACACCAA AACGCTCATC
GCCAACCACC TTGCCGCCGC CGCCGATGCA GATGTGATCG TGTTGGGATG TACCCACTTT
CCCCCACTGA CCCCTCTCAT TAGAGCATGT GCCGGCCCAG AGGTAACGAT TATCGATACC
GGACCGGCCG TTGCAGCTCA AACTGCTCGC ATCGCCGAAC GAATTGGGCT TCCCCGCGGT
GAGGGAACGC TACGCTGCTT CACGACCGGT GATCCGGAGG CAATTGCACA AGCGCTTGTT
CATGTATGGG GTGAACCGCT CCCCTTAACC GCGGTTCGGA TTGAGTCTGT TCCGACCGCA
CCGTCTCTCG TCATCTGTTG A
 
Protein sequence
MIGIFDSGLG GLTVTRAIHE RLPTADLLYL ADSAYCPYGP RPVEEIRARA LACGQWLVEQ 
GAQIVVVACN TATAAAIEVL RSTLPVPVVG MEPGVKPAVA ATRRGKVAVM ATSGTLASDR
FRALINAYAA EVEVYALACP DLVEQVEAGA IADEYTKTLI ANHLAAAADA DVIVLGCTHF
PPLTPLIRAC AGPEVTIIDT GPAVAAQTAR IAERIGLPRG EGTLRCFTTG DPEAIAQALV
HVWGEPLPLT AVRIESVPTA PSLVIC