Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3185 |
Symbol | |
ID | 7269934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3864410 |
End bp | 3865966 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643568006 |
Product | transcriptional regulator, CdaR |
Protein accession | YP_002464479 |
Protein GI | 219850046 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.731568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCA TCACTGTGCG CGATGTTGTG CGATTGGCAT TGCCGGATGG AACCACGGTG GTAGCCGGGG CCACCAACTT AGGCCGTCAA GTGAGTTGGA TCGCCACCCT GCGGGCGACA CTACCGGCTT TTGCCGAGCT TCGCGGCGGT GAACTTGCCT TACTATCGGT TGCAGCGGCA CAAGCTCTTG ATCCACGGTT AACCCTGGAC GTATTGGTAC GTCGCTTGGC GCAAGCACCG GTGCCAATTG CCGGTGTGGT TGCCTTAGGT ACCATCACGC CGAGTGATGT GCAGGCGGCG GAGGAAGCCC GGTTACCGTT ATTGCAATTG CCTGATAGCG CCGATCTGCG GGAAGTTGAG CGTGAGATTA AGCGCTTGAT TACCGATTAT GAAGCGCAAT TTGAACGTCG AGCTGCGCAA CTGTACGATC TACTCACCCA GTGCTCGTTG CAGGGTGGCG GGATCGGCGG GTTGCTCGAT TTGTTGCACG AGCGGACCGG CCAGAGTGTC GCTTGTTATG CACCAAACGG CGTACTGCGC GCGCAACGCG GGCGTGGTCA GGCGCGGTTG GCGTTGCAGG CGTTGCGTCC AACTGCGCGT GGTGAGATAA CGTTACTCAA TCAGCAGATT TGGGTTGAGC CGATCGGTAA TCAAAATGTA CCAACCGGCT ACGTCGCCAT TGCCGGTCCT ACCCTCGATC GCTGGGATCA GACGGCAGTG CAGCGGGGTG CGCTGGCATT GGCGTTAGAG CTGGCAAAGG AACAAGCCGT GCAGGCGGCT GAGGAACGGT TGCGCGGTGA CTTTATCGCC AGTATTTTGG TCGGTACCTC CGGTGATCTC GCCGCCGCGA TCCAGCGCGG TCAAGAGCTT GGCTATACGC TGAACATGCC TCATACCGCA TTGTTGGTGC ATATCGATGC GGCAAGTGTG GCAACCTTGG GACGTGCGGC GGCAAATATT CAGAGTGAGT TGAAGCGGCT AAATGTCAAC GCGCCGATCT CACGTCGTGA GAGTAGTGTG CTTTGTATGA TACCGACGGT GAGTATCGCC CGAACGCGCG AGTTGGCCGA GCAGTTACGC GAACGACTGC TGCCAGATCA CCCCCATCTG GTGATAGCGA TGGGTACGCC GGTGGCGCAT TTGTCTGAAT GGCGGCGTTC GCTCGAAGAG GCTGAGCAAG CATTGAGCCT AGGGCGCCAG CTTTTTGGTA ATGATCGCGT GTTGGCTTTT GCCGATCTTG GTGTGTATCG CTTGTTAATC CGTTTGCGTG AGACACCTGA GCTGTGGTCA TTTTATCGTG AGACGTTGGC CAGCCTTGCG GAGTACGATG CACGCCAGCA CGCCGATCTG ATCAAAACCC TTGAAGCCTA TTTTAACCAT CTCGGTAATC TGCGGGCAAC TTCTGAGGCG TTATACATTC ACCGGAATAC GCTCCTTTAC CGTCTTGAAC GGATCAAAGA AATTAGCGGG ATGGATCTCG ATAATGCCGA AGAGTATTTT GCCTTGTGGT TGGCGATCCG TGTCCATCGT ATCCTGGCGA CCCTCAACGA TGGATAA
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Protein sequence | MTTITVRDVV RLALPDGTTV VAGATNLGRQ VSWIATLRAT LPAFAELRGG ELALLSVAAA QALDPRLTLD VLVRRLAQAP VPIAGVVALG TITPSDVQAA EEARLPLLQL PDSADLREVE REIKRLITDY EAQFERRAAQ LYDLLTQCSL QGGGIGGLLD LLHERTGQSV ACYAPNGVLR AQRGRGQARL ALQALRPTAR GEITLLNQQI WVEPIGNQNV PTGYVAIAGP TLDRWDQTAV QRGALALALE LAKEQAVQAA EERLRGDFIA SILVGTSGDL AAAIQRGQEL GYTLNMPHTA LLVHIDAASV ATLGRAAANI QSELKRLNVN APISRRESSV LCMIPTVSIA RTRELAEQLR ERLLPDHPHL VIAMGTPVAH LSEWRRSLEE AEQALSLGRQ LFGNDRVLAF ADLGVYRLLI RLRETPELWS FYRETLASLA EYDARQHADL IKTLEAYFNH LGNLRATSEA LYIHRNTLLY RLERIKEISG MDLDNAEEYF ALWLAIRVHR ILATLNDG
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