Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3180 |
Symbol | |
ID | 7269929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3858180 |
End bp | 3860087 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643568001 |
Product | alpha amylase catalytic region |
Protein accession | YP_002464474 |
Protein GI | 219850041 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000161809 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.231974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACAGA TACACGTTTC TGCCGATTTT ATTTTTGGCA CGATGGCCAC CGACAGCCGC CGGCTTGGTT ATGTGCGCGC TGAATTGGCC GGTATTTCGC ACCGCTACCG TATGGAACCA TCTGCCCCCA AAGCCGGTGA GCCGGTGCGG CTATTTGTGA CTCTTGGTCC CTCGATTACT GCCGATCACG TCAGTGTCTA CTACACCACC GATGGCAGCG AACCGGCGGG GCAGCGCGGT CAGTCTGCGC CCGGCAGTGC AGTAGCTCCC GGTCATCGGA TCGCCAGTCA GTGGGACACC TTACTGTGGG GGTATGCCGA AGAATGGATG ATTGAGTTAC CTCCCCAGCC CACCGGCACC GTCGTGCGTT ATCGGATTGA AGCGTGGCTA AGTGAAGGCA AGGGTTCGCT ATGGTATAGC GAAGTGATCG GCGCGACTGA AGGCGATGGG AGTGTGATCG GGCAACCCGG CCCCGGCGAT CACTATCTGC GCGAGATGGG CGCCGAGTTC AACCTCACGT TCTACCGTCG GCCCCGCACG TGTGCCTACC GCGTCGGTGA TGAGGGAACA CCGGCGTGGC TCGATGAAGC GCTGATCTAC CATATCTTTG TCGACCGTTT TCACCCCGGC CCCGGTCGGC AATTCGCCGA TCCACCGACA CCGATGGGAA TTTACGGGGG TACGTTAGCC GGTATTACCG CTCAGCTCGA CTATATGGCC AGTCTGGGCA CAACTGCGAT TTGGCTCTCC CCACTCTTTC CTTCACCGTC TCACCACGGC TACGATGCTA CCGATTACTA CAGCGTCGAG CCGCGGTTAG GCACTATGAC CGATCTGCAA CAGCTACTTG CCGCCGCTCA TGATCGCGGC CTGCGCGTGC TCCTCGACTT CACCGCCAAC CATTTCTCGA ACCAACACCC CATCTTCCAA CGTGCAATCA GTGACCCGAC CAGCCCAGAA CGCGATTGGT TTATTTTTAC CCGCTACCCC GACCACTACG TCTCGTTTTT TGGCGTACAC GAATTGCCAC AACTCGACCT CGACCATCCG GCAGCACGAC AATTTATGAT CGATGCGGCT CGTTACTGGC TCGAACAGGG AATAGACGGC TACCGGCTCG ACTATACCAT TGGCCCCTCA CACGATTTCT GGACGGTCTT TCGGGCTGCA ATGCGTACCG TCAAACCTGA TTGTGTCTTG CTCGGTGAAG CAGTCGATAC GGCTGACGTT CTGCGCTCGT ATTACGGTCG GCTCGATGGG TGTCTCGATT TCTTGCTGTT GCAAGCGTTG CGTCGTTTCT TCGCTTTCGA TGAAATGAAC GCCAGCGCTT TCGCCGTCTT TCTCCAACGT CATTTGGCAT ACTTCCCCAC CGGCTTCGCT TTGCCCAGTT TCCTCGACAA CCACGATATG AACCGCTTTT TGTGGGTGGT CCGTGGTGAT ACCCGGCGGC TCCGGCTCGC CGCCCTCTGT CAATACACAC TACCGCACAC ACCGATTCTC TACTACGGTA CGGAAGTCGG ACTGAGCCAG CGCCGCGATG TTCGCCATGC CGATGGCAGT GGTCACCCTG AAGAATCACG GCTACCGATG CTGTGGGGTG AGGCCCAAGA TCGTGAACTG TTGGCATTTT ACCGTCGACT CGGCGCCTTC CGCCGGTCTA CAACGGCAGT CTGGCGTGGT CGGCGCACCT TTTCCCACAT CGATAACCAA CACGGACAAC TCGCCTATAC GTGTACTGCC AACGGCGAAA CGTGGTTGGT TGCGCTTCAT CACTCATCAC AGGCCGGTAG CATACCGCTC CCGGCAGGAA CATGGGACAT AGCGTTCGTC ACGCAAACTG CCGAAATCGT TGCCGGAAAG GTGTGGCTCC CGGCGTATGG CGGTGCTGTG TTACGACAAT TGTCCTAG
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Protein sequence | MEQIHVSADF IFGTMATDSR RLGYVRAELA GISHRYRMEP SAPKAGEPVR LFVTLGPSIT ADHVSVYYTT DGSEPAGQRG QSAPGSAVAP GHRIASQWDT LLWGYAEEWM IELPPQPTGT VVRYRIEAWL SEGKGSLWYS EVIGATEGDG SVIGQPGPGD HYLREMGAEF NLTFYRRPRT CAYRVGDEGT PAWLDEALIY HIFVDRFHPG PGRQFADPPT PMGIYGGTLA GITAQLDYMA SLGTTAIWLS PLFPSPSHHG YDATDYYSVE PRLGTMTDLQ QLLAAAHDRG LRVLLDFTAN HFSNQHPIFQ RAISDPTSPE RDWFIFTRYP DHYVSFFGVH ELPQLDLDHP AARQFMIDAA RYWLEQGIDG YRLDYTIGPS HDFWTVFRAA MRTVKPDCVL LGEAVDTADV LRSYYGRLDG CLDFLLLQAL RRFFAFDEMN ASAFAVFLQR HLAYFPTGFA LPSFLDNHDM NRFLWVVRGD TRRLRLAALC QYTLPHTPIL YYGTEVGLSQ RRDVRHADGS GHPEESRLPM LWGEAQDREL LAFYRRLGAF RRSTTAVWRG RRTFSHIDNQ HGQLAYTCTA NGETWLVALH HSSQAGSIPL PAGTWDIAFV TQTAEIVAGK VWLPAYGGAV LRQLS
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