Gene Cagg_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3089 
Symbol 
ID7269506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3748236 
End bp3748919 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content59% 
IMG OID643567909 
ProductN-carbamoylsarcosine amidase 
Protein accessionYP_002464383 
Protein GI219849950 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.109998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000410333 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGCT TTGAGCAACT TACCGACGAC TATCGCCAGC ACGGCTTAGC CGGCCGAGTT 
GGCTTCGGCG AACAGCCGGC ACTGCTGGTA ATTGACTTCA TCAAGGCCTA CACCACACCC
GGCTCACCAT TGTACGCCGC ACCCGGCGTG CCGGACGCAG TGCGCGCCAG CCAACCGGTG
TTAGCCGCTG CCCGCGCCGC CGGCATTCCT GTCATCTACA CCACCGTCGC CTATGCAGCC
GATGGTCGCG ACGGTGGTAT ATTCGTACAA AAAGTGCCGG CGCTGCGCCA ACTCACCCAC
GACTCGCCGC TGGTTGCGAT TGTTGATGAG CTTCGTCCAC AAGCCGGTGA ACTGGTGATC
GAAAAGAAAT ACGCCAGTGC CTTCTTCGGT ACCCACCTTG CTGCTACGCT GACCGCCCTA
CGGATCGACA CGGTGATCAT GGTGGGCTGC TCGACGAGCG GCTGTATCCG TGCCAGTGCG
GTCGATGGGA TGCAACACGG CTTTCGGGTG ATTGTCCCTC GTGAATGTGT CGGTGATCGA
GCGCCTGAAC CACACCTCGC CAACCTCTTT GATATTGACG GAAAATACGG CGATGTCGTA
AGCGTCAACG ACGTATTAGC ATATCTGCAC CGACGCTCCA TAAATGCGTC GTCCTCGCCA
ATCAATACCG AAGTCGTCGA ATAG
 
Protein sequence
MTRFEQLTDD YRQHGLAGRV GFGEQPALLV IDFIKAYTTP GSPLYAAPGV PDAVRASQPV 
LAAARAAGIP VIYTTVAYAA DGRDGGIFVQ KVPALRQLTH DSPLVAIVDE LRPQAGELVI
EKKYASAFFG THLAATLTAL RIDTVIMVGC STSGCIRASA VDGMQHGFRV IVPRECVGDR
APEPHLANLF DIDGKYGDVV SVNDVLAYLH RRSINASSSP INTEVVE