| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3079 |
|---|
| Symbol | |
|---|
| ID | 7269496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3741088 |
|---|
| End bp | 3742116 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643567899 |
|---|
| Product | dTDP-glucose 4,6-dehydratase |
|---|
| Protein accession | YP_002464373 |
|---|
| Protein GI | 219849940 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
|---|
| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.544275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.000000030667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAATC TTCTCGTGAC CGGTGGAGCC GGCTTTATTG GTAGCAACTT CGTGCATTAT
ATGCTCGGCA AATACGACGA TTATCGCATC GTCGTGTACG ATAAGCTGAC GTATGCCGGT
AATCTTGCTA ATCTGGCACC GGTTGCCAAC GATCCGCGGT TTGTTTTTGT GCGTGGCGAC
ATCTGTGATA TCGATGCAGT GCGGGAAACG GTGCGCACGT ATGATATCGA TACCATCATC
AATTTTGCTG CCGAGACGCA CGTCGATCGC TCAATCATGG CGCCCGATGC CGTAGTGCGC
ACCAATGTAA ACGGTACGTG GGCATTACTG GAAGTGGCAC GTGAACTGAA ACTCGAACGT
TTTCACCAGA TTAGTACCGA CGAAGTGTAC GGCGCTATTC CGGCCCCGCG CCGTTCGCGT
GAGGGTGATC CGCTCGAACC ACGCAGTCCC TATTCGGCCA GCAAAGCCGG AGCCGAACAT
CTCGTCTACG CTTACTACAT CACCTACGGT GTACCGATCA CGATTACTCG CGGCTCGAAT
AACATCGGTC CCTATCATTA TCCCGAAAAG GCGGTACCCC TCTTCACCAC CAACGCCATC
GATAATCTAC CCTTGCCGAT CTACGGTGAT GGTCTCCAGG TACGCGATTA TCAGTACGTG
CTCGATCATT GTGAAGCCAT CGATGTCGTG CTGCACAAAG GCCAGATCGG TGAGGTCTAC
AACGTAGGGA CCGAGGTCGA GACGCCGAAT ATCGAGATGG CGCGCAAGAT TCTCGATATT
CTCGGCAGGC CGCATAGTCT CATTCAGCAC GTTGCCGACC GTGCCGGTCA TGATCGCCGC
TATGCCCTCG ATTGCTCGAA ACTGCGCGCG CTTGGGTGGC GTTCACGCCA TACCTTCGAT
GAAGCGCTGG AAAAGACGGT ACGCTGGTTT GTTGAAAATG AAGCGTGGTG GCGCCCGATC
AAGTCAGGTG AGTATATGGA ATACTACCGT CGCCAGTATC TTGAACGCAG TGGGTATCCG
GTGGTGTAG
|
|---|
| Protein sequence | MRNLLVTGGA GFIGSNFVHY MLGKYDDYRI VVYDKLTYAG NLANLAPVAN DPRFVFVRGD
ICDIDAVRET VRTYDIDTII NFAAETHVDR SIMAPDAVVR TNVNGTWALL EVARELKLER
FHQISTDEVY GAIPAPRRSR EGDPLEPRSP YSASKAGAEH LVYAYYITYG VPITITRGSN
NIGPYHYPEK AVPLFTTNAI DNLPLPIYGD GLQVRDYQYV LDHCEAIDVV LHKGQIGEVY
NVGTEVETPN IEMARKILDI LGRPHSLIQH VADRAGHDRR YALDCSKLRA LGWRSRHTFD
EALEKTVRWF VENEAWWRPI KSGEYMEYYR RQYLERSGYP VV
|
|---|
| |