Gene Cagg_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2996 
SymbolrplQ 
ID7266527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3666153 
End bp3666503 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content58% 
IMG OID643567818 
Product50S ribosomal protein L17 
Protein accessionYP_002464292 
Protein GI219849859 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00803225 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACACC GTCATGCCGG AAAATTATTG GGGCGGTCGT ATGAGCACCG CAAGGCGCTC 
TACCGCAACC TGATGATCGC TCTGATCGAA CACAAGAAGA TTAAGACAAC GCTGGCCAAA
GCGCGGGCCG TCCAGCCGGA AATCGAGCAC TTGATCTCGA TTGCCCGTGA AGATACCCCG
CATGCGCGTC GGATGGCGCT CTCGAAGCTG GCCAGCAAGA ACGCTATGCG CAAGCTATTT
ACCTTTGCGC CGACGACCTA CGGCGGACGC AACGGAGGCT ATACTCGCAT TACCAAGCTC
GGCCCACGTC GTGGTGATGG AGCCGAGATG GCCTTGATCG AGTTGATCTG A
 
Protein sequence
MRHRHAGKLL GRSYEHRKAL YRNLMIALIE HKKIKTTLAK ARAVQPEIEH LISIAREDTP 
HARRMALSKL ASKNAMRKLF TFAPTTYGGR NGGYTRITKL GPRRGDGAEM ALIELI