Gene Cagg_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2973 
Symbol 
ID7266504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3644228 
End bp3645202 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content52% 
IMG OID643567795 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_002464269 
Protein GI219849836 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000221359 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTACC TCTTCTACGG AGCAAATGAA TTGGCGCGTA GCGAAGCGCT GGCCGAATTA 
CGGTCGCATT TGCCGGCTGA CGTTGCCGAT CTGAATGTAA GTGTGCTTGA CGGGCGGAAA
TTGACGATTG AACAACTCGT TGCGGCCTGC GAAGCGCACC CGTTTTTGGC CGACCGGAGA
TTGGTGATTG TTTACAATGC CCTCAAACAC AGTAAGGCCG GCAAAGCACG TGAAGAACTA
CGTGACTATT GCGCACGGGT ACCGCCGACG TGTGATTTGG TGTTTGTCGA ACAGGAAGAT
ATCGATCGAC GACACCTTCT CTTCACCTAT CTGAGCAAAC ATGGTGTGGT ACGCGAATTT
CCACTACTCA GCGGTTCGGA ACTGTTGCAC TGGATTGGTC AGCGCGCTCG TTTGCTGTCG
GTGACAATTG AACCGGCGGC AGCGCAGCGA CTGGTCGATT TAGCCGGTAA TGATAGTCGT
ACCTTAGTGA ATGAGCTGGC GAAATTGGCC AGTTATGTTG GGAGGGGTGG AAAGATCGAT
CAAGCAGCAG TTGACCGACT GGTTACCGAT CAGCAAGAGC AAAATCTGTT TGCGTTTATC
GATGATCTGA GTGGAAAACG CTTAGGGGCA GCCTTGCGCG GCGCACGCGC ACTTATCGAG
GATGGTGAAG CTCCACACTA CGTGTTGTTT ATGCTGGCAC GACAGATTCG GATTCTGTTG
CACGTTAAGC AGCTCCTCGG CCAGCGTCGT CGAGCTGACG ATATTGCCGG CGAGCTAGGA
TTAAAACCTT TTGTCGCACG GAAAGCGGCA GAACAGGTCC GTCATTTTAC TGTGGCGGAA
TTAGTGACTG CGCATGACCG TCTGCTTGAA CTCGACTACG CGATTAAGAC CGGTAAGATG
CAAGCGGAGA CGGCACTTGA ATTGTTTGTA GTGGAGATTT GTCAATCATC ATCGACGACA
GCACAGCGTC GATAA
 
Protein sequence
MIYLFYGANE LARSEALAEL RSHLPADVAD LNVSVLDGRK LTIEQLVAAC EAHPFLADRR 
LVIVYNALKH SKAGKAREEL RDYCARVPPT CDLVFVEQED IDRRHLLFTY LSKHGVVREF
PLLSGSELLH WIGQRARLLS VTIEPAAAQR LVDLAGNDSR TLVNELAKLA SYVGRGGKID
QAAVDRLVTD QQEQNLFAFI DDLSGKRLGA ALRGARALIE DGEAPHYVLF MLARQIRILL
HVKQLLGQRR RADDIAGELG LKPFVARKAA EQVRHFTVAE LVTAHDRLLE LDYAIKTGKM
QAETALELFV VEICQSSSTT AQRR