Gene Cagg_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2940 
Symbol 
ID7268813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand+ 
Start bp3604124 
End bp3604801 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID643567762 
ProductdTMP kinase 
Protein accessionYP_002464236 
Protein GI219849803 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.230772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGTG GGTTGTTTAT CACGTTTGAG GGGCCAGAGG GAGCCGGCAA GAGCACACAA 
GCACGCCGCC TATATGAGCG TTTGCAAGCT GCGGGCTATC CGGTAATCTT GACACGCGAG 
CCGGGTGGTA CCCGAATTGG AGAACTGATC CGCCGGATTT TGATCGATTT GCGCCATACG 
GAAATGGCTC CCACTACCGA AATATTGTTG TTTTCGGCAG CACGTGCGCA GTTGGTCAGT 
GAATTGATCC GACCTTATCT GGCGACCGGG GGGATTGTAG TGTGTGACCG GTATGCCGAT 
TCGACATTTG CGTACCAGGG CTACGGGCTG GGGCGTGATC TCGAAGAATT GCGGGTGATT 
ACCGAGGTAG CGACCGGGGG GCTTAAGCCC GATCTTACGT TTTACCTGCA AATTGATGTG 
GAAATCGGCT TGCAACGTAA GCAACATGCC CGTGAGCGTT CGGAACGAGG TGGGCAGCCG 
GCTGAATGGA ACCGTCTAGA CGCTCGTGAT TTGGCTTACC ATCGGCGGGT CATGCACGGA 
TTCGTTGAGT TAATGAAACA GGAACCGGAA CGCTGGCATG CACTTGATGC CGATCAGCCG 
GTTGATGAAC TGGCTGAACA AATTTGGCAT GCCGTGATGC CGCTATTGGA TCGGATTACG 
CCGCTTGCTA CGCGATGA
 
Protein sequence
MHRGLFITFE GPEGAGKSTQ ARRLYERLQA AGYPVILTRE PGGTRIGELI RRILIDLRHT 
EMAPTTEILL FSAARAQLVS ELIRPYLATG GIVVCDRYAD STFAYQGYGL GRDLEELRVI 
TEVATGGLKP DLTFYLQIDV EIGLQRKQHA RERSERGGQP AEWNRLDARD LAYHRRVMHG 
FVELMKQEPE RWHALDADQP VDELAEQIWH AVMPLLDRIT PLATR