Gene Cagg_2500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2500 
Symbol 
ID7269346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3044150 
End bp3045568 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content57% 
IMG OID643567326 
Productfumarate lyase 
Protein accessionYP_002463807 
Protein GI219849374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1027] Aspartate ammonia-lyase 
TIGRFAM ID[TIGR00839] aspartate ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGC GCTACCGCAT TGAACGTGAT TCGTTGGGCG AGATGCAGGT GCCGGCTGAG 
GCGCTGTATG GCGCGCAGAC GCAACGGGCT GTGTTGAACT TCCCGGTGAG TGGGATGCGA
CCCTATCCCG CCTTTGTTTG GGCACAGACG ATGATCAAAC GGGCTGCTGC CGAGGTTAAC
CGCGATCTCG GTTTGCTCGA TCCGCAGATC GCGAACGCCA TTATCCAAGC TGCCGAGGAG
GTGTTGGCCG GTCAGCACGC CGATCAGTTT GTGGTTGATC CGTTCCAGGC CGGTGCCGGT
ACCTCGCACA ACATGAACGT CAATGAGGTG CTGGCCAACC GGGCTAACCA AATCTTGGGC
TATCGTCTCG ACGATCCGAA GAAGCCGGTT AGCCCGAATG ACCATGTGAA TATGGCGCAA
TCAACCAATG ATACTATTCC AACGGCGATC CGGCTTGGTT GTTTGTGGCG GCTGAACGAG
TTGCTGACTG CTATCGATAA TCTGGCTACT GCGCTTGAAC AGAAGGCAGT GGAGTTCGAT
GATGTGGTGA AATCGGGACG GACCCACTTG CAAGATGCAG TACCGGTGCG GCTTGGTCAA
GAGTTCGGTG CGTATGCGAA GGCGGTGCGC AACGATATGG AGCGGATCGC GACGGCCGCC
GACCGGTTGC GTCGGATCGG TATCGGTGGG ACGGCGACCG GTACTGGGTT GAATGCTCAC
CCGGAATACC ATGCGCGGAT GGTGGCGAAA CTGAGTGAGC TGACCGGTCA AGAGTTGCGG
TCGTCGGGGA ATCTGTTTGA GTCGATGCAG AGTATGGCTG ATCCCGCTGA TTTCTCGGCG
AGCCTGCGTA CACTTTGTAT TACCCTAGGT CGGATTGCTA ACGACTTCCG CTTGCTTTCC
TCCGGTCCGG CCACCGGTCT CGACGAGATC CGCTTGCCTG CCGTGCAGCC GGGTTCGTCG
ATTATGCCGG GGAAGGTTAA CCCGGTGTTG GCCGAGATGC TGAACATGGC ATGCTACCAC
GTGCAGGGTT GTGATTTGAC GGTGGCGCTG GCGGCGCAAG CCGGTCAGCT TGAGCTAAAC
GTGATGATGC CGATTATTGC CCATAATCTG TTTGAGATGA TGCACGTACT GATCGGTGCG
ATCAATGCTT TCACAACGAA GTGTGTGGTC GGTATCACTG CCAACCGTGA GAAGGCGGCG
GGCTGGTTGG CCAAGAATGC GATCCTGGTG ACAGCACTCA ATCCGGTGAT CGGCTACCTG
AACGGCGCGG CGGTGGCGAA AGAGGCGATG GCTACCGGTA AGACGATCAA AGAGGTGGTC
GTTGAAAAGG GGTTGCTTAC CGCCGAACAG GTTGATCAAC TGCTCGATGT GTATAAGATG
ACCGAGGGCG GGATTCAGGG CATTGCTGCC GCCGGATAA
 
Protein sequence
MTERYRIERD SLGEMQVPAE ALYGAQTQRA VLNFPVSGMR PYPAFVWAQT MIKRAAAEVN 
RDLGLLDPQI ANAIIQAAEE VLAGQHADQF VVDPFQAGAG TSHNMNVNEV LANRANQILG
YRLDDPKKPV SPNDHVNMAQ STNDTIPTAI RLGCLWRLNE LLTAIDNLAT ALEQKAVEFD
DVVKSGRTHL QDAVPVRLGQ EFGAYAKAVR NDMERIATAA DRLRRIGIGG TATGTGLNAH
PEYHARMVAK LSELTGQELR SSGNLFESMQ SMADPADFSA SLRTLCITLG RIANDFRLLS
SGPATGLDEI RLPAVQPGSS IMPGKVNPVL AEMLNMACYH VQGCDLTVAL AAQAGQLELN
VMMPIIAHNL FEMMHVLIGA INAFTTKCVV GITANREKAA GWLAKNAILV TALNPVIGYL
NGAAVAKEAM ATGKTIKEVV VEKGLLTAEQ VDQLLDVYKM TEGGIQGIAA AG