Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2437 |
Symbol | |
ID | 7266160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2957064 |
End bp | 2957714 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643567263 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002463746 |
Protein GI | 219849313 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000237388 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG TACCCTTGAT GCCCGACCCG CGAGTGATTG AAAGTCCGAC GGCGCTCCGC ATTCTCGATG TAGCGACACA ACTTTTTATG CAGCGCGGCT ATCGGGCCGT ATCGATTAGC GACATCATTC ATACTGCCGG TGTGACAAAA CCGACCCTTT ACTACTACTT TAGCGACAAA GAAGACCTGT TTGTGCAGAT GGGGCTAAAG GTGTTGTGGA CGATGAGTCG GCCACTGGCC GAGCTAGCTG CGTCCGAGCG GGCGTTGGTT GAGCGATTGC GCGCAATGGC CGACTTGCTG ATCTCCGGCT ATGAAGGTGA TATGCGCATT ATGCGCCACG AGATGACGGA GCACCTCAGC GCGGCCGCAC GTAGTCGTTT GAGTGCTGCG TTCTATCAAC ACCTCTTCGC GCCGTTAACC AAGATCATGC GTGAAGCGCT CACTGCCGGG GTAGTACGGG CCGATATGTC ACCGGCAATG TTAGCAACGT TATTTCTCAG TCTGTGCGAG ACGTTTCACG AGCTGACTTC AACCAACGCG ATGATGGGGT GGTCGGGTAG CGTCTCGGCG GAGTTATTGG TCGATATCTT TTTGTATGGG GCCGGCACCC GGTCGGCAGA TAATCGTTCA GTAGGAATGG CAGAAGTATG A
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Protein sequence | MTEVPLMPDP RVIESPTALR ILDVATQLFM QRGYRAVSIS DIIHTAGVTK PTLYYYFSDK EDLFVQMGLK VLWTMSRPLA ELAASERALV ERLRAMADLL ISGYEGDMRI MRHEMTEHLS AAARSRLSAA FYQHLFAPLT KIMREALTAG VVRADMSPAM LATLFLSLCE TFHELTSTNA MMGWSGSVSA ELLVDIFLYG AGTRSADNRS VGMAEV
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