Gene Cagg_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2423 
Symbol 
ID7266146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2940884 
End bp2941693 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID643567249 
ProductABC transporter related 
Protein accessionYP_002463732 
Protein GI219849299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCATC GTGATTCGGC AGCGTTGCCT GCACCCCAAA TGGAGATTGA CCGTATTGGT 
CTGAGTTTTG GTGGGGTGCG CGCCTTACTT TCGGTGACCT TCAACATCTA CCCCGGCACG
ATTCAGGCGA TCATTGGCCC CAACGGAGCC GGCAAAACCA GTCTCCTCAA TTGCATCAGC
GGTCTGTATC GCCCACAACA GGGACAAATT CGGTTTGAAG GGCGCAACAT TATCGGTCTG
CCCCCACACC AGATTGCCCG CCTGGGCATT GCCCGTTCGT TTCAGAATAT CGAACTCTTC
CGCCACATGA CGGTCGTTGA TAACCTCATG CTCGGTCGTC ACATCCACAT GCGGAGTGGC
ATTTTTAGTG GCGGCTTCTA TTGGGGACGC GCCCAACGGG AAGAGGTCGA GCATCGCGAA
TTTGTCGAGC AGGTGATCGA TCTGCTCGAA ATTCAGGCGA TCCGCAAGAA GATGGTTGGA
TCGCTTTCGT ATGGTCTGCA AAAGCGGGTT GAGGTAGGCC GGGCGTTAGC AATGAATCCG
CGCCTCTTGC TGCTCGATGA GCCGATGGCC GGAATGAATA GCGAAGAAAA AGAGGATATG
GCTCGTTTCA TCCTCGATAT TAACGAGGAG TACGGGACGA CCATCGTGCT GATCGAGCAT
GATATGGGGG TGGTGATGGA TATTAGCGAT CGGGTTGCCG TGCTCGAGTT CGGTCAGTTG
ATCGCCTATG GTACACCGGA CGAAGTGCGG AGCGATCCGA AAGTGATCGA TGCCTACCTT
GGTCGTGAAC ACGCAATACC ACTAGCGTAA
 
Protein sequence
MTHRDSAALP APQMEIDRIG LSFGGVRALL SVTFNIYPGT IQAIIGPNGA GKTSLLNCIS 
GLYRPQQGQI RFEGRNIIGL PPHQIARLGI ARSFQNIELF RHMTVVDNLM LGRHIHMRSG
IFSGGFYWGR AQREEVEHRE FVEQVIDLLE IQAIRKKMVG SLSYGLQKRV EVGRALAMNP
RLLLLDEPMA GMNSEEKEDM ARFILDINEE YGTTIVLIEH DMGVVMDISD RVAVLEFGQL
IAYGTPDEVR SDPKVIDAYL GREHAIPLA