Gene Cagg_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2039 
Symbol 
ID7269198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2500004 
End bp2500825 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID643566874 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_002463363 
Protein GI219848930 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID[TIGR03220] 2-oxopent-4-enoate hydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC AATCAGTAGC GAGCAGCGGC GTCACGGAAG CAACAATTGC AACGTTAGCG 
CAGCGTCTCG ACCGAGCGTG GGAAGAGCGT TTCACCATTG CCCCGCTGAC CGAGAGCGAG
GGAATTGAAG ATGCTGCAAC CGCGTATCGC ATTCAAACGC ACTGGACAAC GTTGCGGTTG
GCGCGGGGTG AGCGGATCAT CGGGCGCAAA ATTGGCCTGA CCAGCAAGGC TGTACAAGAG
CAGATGGGGG TCAACGAACC GGATTACGGC ACGCTCTGGG CATCACGCTA CTTCCCGGCG
GTCAACGGGC GCGCCGAGGC ACCGGCAGCG ATCTTTCTCC AACCGAGAGT TGAGGGGGAA
CTTGCATTTC TCATTGGTGA AACACTCGAT TGGCCCGAGA TTACGCCACA ACAGGTGATG
GCGGCAACGG TAGCGTTGGC TGCTGCGATT GAGATTGTCG ATAGCCGGAT CGACCGTTGG
CGGATCAAAC TCGCCGACAC CATCGCCGAC AATGCCTCGT ATGGTGGGAT CACCCTTGGC
CCGTGGAGCA AAGCCCTACG AGGGAGCGAT CTGCGAACCA TCGGTATGGT GATGAGTCAC
AACGGCAAAC CGACAGTGTT TGGTGCCGGT GCAGCGGCAC TCGGTCATCC GGCGGTGGCA
GTTGCATGGC TGGCCAACAA ACTGCGCAGC TTTGGCATCC CGCTCCAAGC CGGTGATATT
GTCATTTCAG GCGCGCTAGC GGCCACCATC CCGGCGCAGC AAGGTGATAT TTTCGTATTA
GAAATGCATG GTCAGCCGCC ACTCAGCTTG CGGTTTACAT AG
 
Protein sequence
MPEQSVASSG VTEATIATLA QRLDRAWEER FTIAPLTESE GIEDAATAYR IQTHWTTLRL 
ARGERIIGRK IGLTSKAVQE QMGVNEPDYG TLWASRYFPA VNGRAEAPAA IFLQPRVEGE
LAFLIGETLD WPEITPQQVM AATVALAAAI EIVDSRIDRW RIKLADTIAD NASYGGITLG
PWSKALRGSD LRTIGMVMSH NGKPTVFGAG AAALGHPAVA VAWLANKLRS FGIPLQAGDI
VISGALAATI PAQQGDIFVL EMHGQPPLSL RFT