Gene Cagg_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1959 
Symbol 
ID7268875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2392021 
End bp2393181 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID643566797 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002463290 
Protein GI219848857 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0139885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0025051 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGCGAA CGTGGGCGTT AATCATTGTC GGTTTGCTCT ATTTTGGTGT CGGCTGGATT 
CTGTCGGCAA TCGGGCCGAG CTTACCCGGT TTGGCCGTAC AGGTGAATCG TGATGTTACC
GAACTAGGGG CCGTCTTTAC TGCTTTCTCA CTCGGTGCAG TCCTGGCGTC GGTAGGTGTG
GGCGCTGCAA TTGGGCGCTG GGGTATGCGT ACCGTGATCG CCGGTGGTGC TGCTCTAATG
GGTGGTGGCA TATTGTGGGC AGGGTTTAGC CCAACGCTCC TCGGTTTATT GGCCGGTACC
TTGATCGGAG GGTTTGGGTA TGGCGGAATG TTGGCGGGGG GGAATCTGCT TATTGCACGT
CTGTATCAAG GTGCCGCCGG AGCGCTCAAT GCACTCAACC TTTTTTTCAG CGTTGGCTCA
ATCGGTGGCC CGTTGTTGGT AGCCGCAATG ATTGGACTAT TCGGCCAACC GCAAGCGGCG
ATCTGGCTGG CCGCGATCGT GATGTTGGTG TTGGTGGCGC CGGCCCTGCG ACTCGGTGAA
CCTACCCAAG CGCCAACAGC GCAGATGTCC GGGGCGCCAC GCTGGCTGGC CGCAGTGATG
TTCGGTCTGA TCATGTTTAC GTATATCGGT ACCGAGATCG GGATCGGTGG CTGGATTGCG
CTGATCCTCG AACGAGGGGC CGGGCTGGCC GCACCCCAAG CAGCATTAGG TACGAGCCTC
TTTTGGGGGA TGTTGACCGG TGGACGGTTG GCCGCTACCT TCTGGGGTGA TCGCTTGGGG
CCGCTGAAGT TGCTGTTGTT GTGTTTGGTT GGTCTAGGGC TGAGTGGAGC ATTGTTAGTC
ATCGGTACTA CCCAATTTGG GCTAGCATTA ACGGCAGTGG CACTGATGGG TCTAGCATGT
GGGCCGATTT TTCCCACCAC GATGCTGATG ATTACGCATG CGGCTGGACG GAGCGGAGTT
GCGCTGAGTG TCGCGCTGAC GATTGGTACC GGCGGTGGTC TGTTTCTGCC GGCCTTATTT
GGCTTTTTCA TCGGCTGGTT TGGACCGGCG ATGGGGTCGC TGTTAGTTGT GGTTGATGCT
ATCCTTATGG TGGTGATGTT GGCCGTGGCC TATCGCGGAA TGACGCGGTC GGCACAACTG
GCCGGTATGT CAGCGCAATA A
 
Protein sequence
MKRTWALIIV GLLYFGVGWI LSAIGPSLPG LAVQVNRDVT ELGAVFTAFS LGAVLASVGV 
GAAIGRWGMR TVIAGGAALM GGGILWAGFS PTLLGLLAGT LIGGFGYGGM LAGGNLLIAR
LYQGAAGALN ALNLFFSVGS IGGPLLVAAM IGLFGQPQAA IWLAAIVMLV LVAPALRLGE
PTQAPTAQMS GAPRWLAAVM FGLIMFTYIG TEIGIGGWIA LILERGAGLA APQAALGTSL
FWGMLTGGRL AATFWGDRLG PLKLLLLCLV GLGLSGALLV IGTTQFGLAL TAVALMGLAC
GPIFPTTMLM ITHAAGRSGV ALSVALTIGT GGGLFLPALF GFFIGWFGPA MGSLLVVVDA
ILMVVMLAVA YRGMTRSAQL AGMSAQ