Gene Cagg_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1915 
Symbol 
ID7266406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2348519 
End bp2348677 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content61% 
IMG OID643566752 
ProductFlp/Fap pilin component 
Protein accessionYP_002463246 
Protein GI219848813 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00503365 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00635938 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTCGCA GCTTCTTCGC CAAGGAAGAG GGCCAGGGTC TGGTGGAGTA CGCACTCATC 
CTCGTTCTGA TCGCCGTCGT CGTGATCGGC GCTCTGACCG CCCTGGGCAC CAACATCAGT
GGCCTGTTCT CCCAGCTCGC TGACACCATC CAGCCGTAA
 
Protein sequence
MLRSFFAKEE GQGLVEYALI LVLIAVVVIG ALTALGTNIS GLFSQLADTI QP