| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1789 |
|---|
| Symbol | |
|---|
| ID | 7267701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 2194543 |
|---|
| End bp | 2196807 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643566629 |
|---|
| Product | protein of unknown function DUF95 transmembrane |
|---|
| Protein accession | YP_002463124 |
|---|
| Protein GI | 219848691 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1300] Uncharacterized membrane protein
[COG1668] ABC-type Na+ efflux pump, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.482085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCT TTTGGCTCTC CCAAGCTCCG ACATTGGCCC GATCAGATAC GGTTGCACCG
GCGTGGTGGG TGATTACCCG CCGTGAGTTG CGTGATACAT TGACCGATTG GCGATTGTTG
ATACCGCTGG TTCTGTTGGC GTTGGCACTG CCGACATTGA TAGCCGGGGC ATTGGTGTTG
TTTGTCAATT TTGTGCAACA GGATGCGGTC GCCGTCCAGA TCATGCCCTT TTTGATCTTG
CTGGTAGGGT TCTTACCGGC AGGTTTCTCG CTTATTCTGG CCCTCGAGTC GTTCGCCGGT
GAACGTGAGC GTAATACGTT GGAGACGTTA TTGGCGATGC CGCTTGGTGA TCGTGAGTTG
TATCTGGCCA AGCTGATCGC GGCGCTGGCG TTGCCATTGC TGGGTGCGTT GCTGAGCCAA
CTGGTGTTGG TCACATGGTT GTTGGTTTTA GTGCCTGATG TGGCATTGTC GGCGCTGCAA
CCGCTGCGGT CGCTGTTGTT GCTGGCGTTG GTGATTACGA TGGCGCTGGT GATGGTCGGC
GGTGCAGTGA TTATCTCGTC GCATGTGACA ACGGTACGCG CAGCGAGTTT GTTGTCGAGT
TTGGTGCTCG TGCCGATGGC ATTGATCGTG CAACTGATCG CATTTTTGAT CGTTAGCGAT
CGTTGGGAGC TGGTGGTAGC GCTGTGGGTT GGCTTGGTGA TAGCGGCCGC TGGGTTGGTG
CAGATCGGGA TGCGGGCGTT TAGTCGGGAA GAGTTGTTGG CCCGTGAGCA GATTCGCCGA
TCGTGGTTTG GACAGCGCAA ACGACCACGT CGCCAGATTG CATGGTTTGG CGGTGGTTCG
ATCTGGATCG TGGCGCGTCG CGAGCTGATC GAGATTACTC GTGATTGGCG TTCGGTAGGG
TTGCTGATCT TTTTGCTGAT CTTGATGCCG GTTGGGTTGG TGACAGGGAT TCGCGCACTC
TATCCTCAGC TCAAGGATCC GCTGGCATTG GCGCCACTGA TCCCGTTTGG TGGGGTGCTG
GCCGGGTTTG TTCCGATCAG CTTTGCATTG GTCGCCGCGC TTGAGTCGTT TGTCGGTGAA
CGCGAACGTA ATACGCTCGA AGCCCTCTGT GCGTTACCGG TGACCGATCG GCAGCTCTTT
TTCGGTAAAC TGGTCGGTAC GTTGCTGATC CCGCTGCTGA CTGCACTGCT CACCCAGTAC
CTGTTTTACG GTTTAGTGGC ACTGAACTTT CCCGATTTGT ATGCCGATGG CATGTCGCCG
GCGCTGTTGC TTCAGATGGG GCTGCTGACC GTCGTGGTGG CAGTGGCTTT AGTGACCGGC
GCTGTGAGTC TCTCGATCCA CGCCGGTAGC GTGCGCGAAG CGTCGATGTT GGCGTCGGGT
ATTTTGTTGC CGACGACGGC ACTCTTGCAA GCTCAGGCGC CGTATTTTAT TGCTCGCCGG
TTCGATGTGA TCTGGCTTGG TATGCTGGCA ATCTTCGTTG TCGGATTGGC CTTTTTACGC
AGCGGCTTGC AAACTTTCCG GCGTGCGGCG ATCTTTTCGC GTAACCGGGA AGAGATGGGC
TTACGCCGGT TGTGGGCAGT CTTCCGTCGC TTTTTTTGTG AATACCACCC GGCCGGCGTA
CCACTGTACG AGTATGTCGG TTTGCCATTC TCACCGCTGC GATTTTATCG CTATGAGTTG
CCGATGTTGT TGCATGAATT GCGTCTGCCC TTAGCCGTGA GCTTGTTGGC AGCGATCGGT
GGGATTTGGT TTGGGATGTC GCAGGCTTCG GTGAGGGTCT TCCCATCGGT AGAACGGACG
CTCGATCAGA TTGCGTATGG CCCCGACCCA TCGCTATGGT TGGTGCTGTT TGTCGTTTTC
AATAACTTGC GTGTATCAAT CCTCTCAAAC CTCTTTGCCC CCTTCAGTTT GGGTGTGTTT
CCCTTCCTTG TGCCGGCGAC GGTCTTTGCC CAGATTGGCT ATGTCTGCGG GCGGCTGATC
GAACGAGGTG GGGTGGGGAC GGATAACCCG CTCACGTTCC TTTTCGCCTA CCTGCTTCCA
CACGGCAGCA TTGAATTGCC GGTGTTTATG CTCAGTGCGG CGTTGGGGTT GCGGATGGGG
GCAGCAGTGT TGACTGCTCC GGGTGAGTTT ACCGTCGGCG AGAATCTGTT GTGGGCTGCT
GCACAGACGG TAAAGGTGTG GTTGCTCCTG ATTGCGCCGC TGGTGGTGGT TGCCGCGCTG
ATCGAGGGCT TGATTACGCC ACTGGTGATT AGATGGGCGT ATTGA
|
|---|
| Protein sequence | MKRFWLSQAP TLARSDTVAP AWWVITRREL RDTLTDWRLL IPLVLLALAL PTLIAGALVL
FVNFVQQDAV AVQIMPFLIL LVGFLPAGFS LILALESFAG ERERNTLETL LAMPLGDREL
YLAKLIAALA LPLLGALLSQ LVLVTWLLVL VPDVALSALQ PLRSLLLLAL VITMALVMVG
GAVIISSHVT TVRAASLLSS LVLVPMALIV QLIAFLIVSD RWELVVALWV GLVIAAAGLV
QIGMRAFSRE ELLAREQIRR SWFGQRKRPR RQIAWFGGGS IWIVARRELI EITRDWRSVG
LLIFLLILMP VGLVTGIRAL YPQLKDPLAL APLIPFGGVL AGFVPISFAL VAALESFVGE
RERNTLEALC ALPVTDRQLF FGKLVGTLLI PLLTALLTQY LFYGLVALNF PDLYADGMSP
ALLLQMGLLT VVVAVALVTG AVSLSIHAGS VREASMLASG ILLPTTALLQ AQAPYFIARR
FDVIWLGMLA IFVVGLAFLR SGLQTFRRAA IFSRNREEMG LRRLWAVFRR FFCEYHPAGV
PLYEYVGLPF SPLRFYRYEL PMLLHELRLP LAVSLLAAIG GIWFGMSQAS VRVFPSVERT
LDQIAYGPDP SLWLVLFVVF NNLRVSILSN LFAPFSLGVF PFLVPATVFA QIGYVCGRLI
ERGGVGTDNP LTFLFAYLLP HGSIELPVFM LSAALGLRMG AAVLTAPGEF TVGENLLWAA
AQTVKVWLLL IAPLVVVAAL IEGLITPLVI RWAY
|
|---|
| |