Gene Cagg_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1746 
Symbol 
ID7269452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2135115 
End bp2135780 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID643566588 
Productregulatory protein RecX 
Protein accessionYP_002463083 
Protein GI219848650 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0135931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCG GTACCATTAC TGCTATTCGG CAACAAACGA ACGATCCACA GCGTGTTACT 
ATTTTTATTG ACGGCGAGTT TGCCCTTGGG ATCAGCCTCA ATACCCTTGT ACGTGAGCGT
TTGGCAGTTG GGGTTGTCGT TGATGAGGAG GGTTGGCAGC GACTGGTTAC CAGCGAACAG
TCCGATCAAG CGTTGCAAAA GGCTTTACAG CAACTTGAAC GACGTCCGCG TTCTACTGTC
GAGCTTTACC GCTATTTGCA ACGTAAGGGT TTTGGTGAAG AGGTATGCAC TCAGACTATT
GCGCGCTTGC AAGAGTTGGG TCTACTTAAT GATATTGAGT TTGCTGCACG TTGGATCGCC
AACCGTCGCG CTTTGCGGCC ACGCGGTGAG CGTGTGTTAC GTGCTGAGTT GCGTCAGAAG
GGAGTTGACC CGGAAGTTAT CGAGACAGCG TTGGCCGCGG AGGATGATGG GGTTGGTGAG
CGTGAACGGG CTATCGCCGT TGCCCGTTCT GTCTTAGTAC GCTATGCAGC ACTCACCGAT
TGGGCCGTCT TTCAACGCCG ACTCGGTGGT TATTTGCTCC GACGGGGCTT CACCGGCGAG
ATTGTTCGTC CTATTCTCAG ATTGCTTTGG CGTGAATTGC ACCCGTCAGA TGAGATCCCG
GAGTGA
 
Protein sequence
MPTGTITAIR QQTNDPQRVT IFIDGEFALG ISLNTLVRER LAVGVVVDEE GWQRLVTSEQ 
SDQALQKALQ QLERRPRSTV ELYRYLQRKG FGEEVCTQTI ARLQELGLLN DIEFAARWIA
NRRALRPRGE RVLRAELRQK GVDPEVIETA LAAEDDGVGE RERAIAVARS VLVRYAALTD
WAVFQRRLGG YLLRRGFTGE IVRPILRLLW RELHPSDEIP E