Gene Cagg_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1685 
Symbol 
ID7268987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2056536 
End bp2057549 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content58% 
IMG OID643566527 
Producttranscriptional regulator, LacI family 
Protein accessionYP_002463022 
Protein GI219848589 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATCA CACTCGATGA AATTGCTCGG CGGGCCGGAG TCTCACGCTC GACCGCCTCA 
CGGGTCATCA ACAACCACCC GCACGTCAAT CCGGCGGTAC GCGAACGGGT GTGGCAGGCC
ATCCGCGAAA CCAATTACCA GCCCAACCTA CCGGCGCGTT CACTGGCCAG CCGCCGCTCG
CAGGTGATTG GGATCATTAT TCCGCAGCCG ATCCATACCC TCTTTGCCGA TCCCTACTTC
CCATTGTTGA TCGAAGGCAT TGCCCAAGTC TGCAACGAAC GGCAATTTTC GATTATGCTG
GAACTGGCCA CTAATCCAAC CGGCGATCCA TACCGGCACA TTGGCCGGCA AGGTTTTCTC
GAGGGTGCCA TCGTGGCCTC AGCCATCGAA GATCACTTTC TCAGTCAATG GTTAGCCCAA
GAGAGCATCC CGGTGGTCTC GATTGGCCGG ATTAGCACCC ATCCGGCAAT TCCCTACGTT
GATGTAGATA ACCGCCAAGG TGCGCGGATG ATGATCGAGC ACTTGCTGCG GTGCGGTTAT
CGCCGGATTG CGACGATTAC CGGCCCGATG AATATCGTGG CCGGGCGCGA TCGCTTTGCC
GGGTACTGTG ATGCCCTCGA CGCTGCCGGC TTGCCGCTGT TGCCCGAACT CATCGTTGAA
GGCAACTTTA GCGAGCAGAG TGGATTTAGC GCGATGCAGA GCCTCTTGCA ACGAGAACCA
CGACCCGATG CGGTCTTTGC TGCGAGCGAC ATGATGGCAC TGGGCGCATT CAAAGCGCTG
CGCGCTGTCG GACTAAGCGT ACCCGACGAC ATCGGCTTAG GCGGATTTGA CGACATTCCA
CTAGCGGCAG CGATGACACC GACTCTTACC ACCGTGCGCC AACCGATCAA CGAACTTGGT
CAAACGGCGG CACGATTGTT ACTCGACCGC ATCACTACCG CAGCTCGCGA CCTCGCCGTC
GAGCGGGTGA TATTGCCGAC CACATTAGTG ATTCGCGAGA GCTGCGTTCG GTAA
 
Protein sequence
MHITLDEIAR RAGVSRSTAS RVINNHPHVN PAVRERVWQA IRETNYQPNL PARSLASRRS 
QVIGIIIPQP IHTLFADPYF PLLIEGIAQV CNERQFSIML ELATNPTGDP YRHIGRQGFL
EGAIVASAIE DHFLSQWLAQ ESIPVVSIGR ISTHPAIPYV DVDNRQGARM MIEHLLRCGY
RRIATITGPM NIVAGRDRFA GYCDALDAAG LPLLPELIVE GNFSEQSGFS AMQSLLQREP
RPDAVFAASD MMALGAFKAL RAVGLSVPDD IGLGGFDDIP LAAAMTPTLT TVRQPINELG
QTAARLLLDR ITTAARDLAV ERVILPTTLV IRESCVR