Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1685 |
Symbol | |
ID | 7268987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2056536 |
End bp | 2057549 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643566527 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_002463022 |
Protein GI | 219848589 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATATCA CACTCGATGA AATTGCTCGG CGGGCCGGAG TCTCACGCTC GACCGCCTCA CGGGTCATCA ACAACCACCC GCACGTCAAT CCGGCGGTAC GCGAACGGGT GTGGCAGGCC ATCCGCGAAA CCAATTACCA GCCCAACCTA CCGGCGCGTT CACTGGCCAG CCGCCGCTCG CAGGTGATTG GGATCATTAT TCCGCAGCCG ATCCATACCC TCTTTGCCGA TCCCTACTTC CCATTGTTGA TCGAAGGCAT TGCCCAAGTC TGCAACGAAC GGCAATTTTC GATTATGCTG GAACTGGCCA CTAATCCAAC CGGCGATCCA TACCGGCACA TTGGCCGGCA AGGTTTTCTC GAGGGTGCCA TCGTGGCCTC AGCCATCGAA GATCACTTTC TCAGTCAATG GTTAGCCCAA GAGAGCATCC CGGTGGTCTC GATTGGCCGG ATTAGCACCC ATCCGGCAAT TCCCTACGTT GATGTAGATA ACCGCCAAGG TGCGCGGATG ATGATCGAGC ACTTGCTGCG GTGCGGTTAT CGCCGGATTG CGACGATTAC CGGCCCGATG AATATCGTGG CCGGGCGCGA TCGCTTTGCC GGGTACTGTG ATGCCCTCGA CGCTGCCGGC TTGCCGCTGT TGCCCGAACT CATCGTTGAA GGCAACTTTA GCGAGCAGAG TGGATTTAGC GCGATGCAGA GCCTCTTGCA ACGAGAACCA CGACCCGATG CGGTCTTTGC TGCGAGCGAC ATGATGGCAC TGGGCGCATT CAAAGCGCTG CGCGCTGTCG GACTAAGCGT ACCCGACGAC ATCGGCTTAG GCGGATTTGA CGACATTCCA CTAGCGGCAG CGATGACACC GACTCTTACC ACCGTGCGCC AACCGATCAA CGAACTTGGT CAAACGGCGG CACGATTGTT ACTCGACCGC ATCACTACCG CAGCTCGCGA CCTCGCCGTC GAGCGGGTGA TATTGCCGAC CACATTAGTG ATTCGCGAGA GCTGCGTTCG GTAA
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Protein sequence | MHITLDEIAR RAGVSRSTAS RVINNHPHVN PAVRERVWQA IRETNYQPNL PARSLASRRS QVIGIIIPQP IHTLFADPYF PLLIEGIAQV CNERQFSIML ELATNPTGDP YRHIGRQGFL EGAIVASAIE DHFLSQWLAQ ESIPVVSIGR ISTHPAIPYV DVDNRQGARM MIEHLLRCGY RRIATITGPM NIVAGRDRFA GYCDALDAAG LPLLPELIVE GNFSEQSGFS AMQSLLQREP RPDAVFAASD MMALGAFKAL RAVGLSVPDD IGLGGFDDIP LAAAMTPTLT TVRQPINELG QTAARLLLDR ITTAARDLAV ERVILPTTLV IRESCVR
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