| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1563 |
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| Symbol | |
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| ID | 7267340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 1912775 |
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| End bp | 1913950 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643566405 |
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| Product | Lycopene beta and epsilon cyclase |
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| Protein accession | YP_002462901 |
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| Protein GI | 219848468 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01790] lycopene cyclase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTACG ACTACATCAT TGCCGGCGCA GGTGCTGCCG GTTTGAGTTT AGCTTATCAT
CTTGGTCAGA GTCCGTTAGC CGGTCATTCA ATCCTTTTAG TAGACCCCAA TGCTGTCCGA
CGCAATGATC GCACATGGTG TTTTTGGGAG GTGGGTACCG GCCCGTTTGA GGCTGTGGTA
TCCCGGCGTT GGGATTATCT CTGGCTGTAC GATGAGAGTT GGTCGGCGCG GTTGGCGATT
GCCCCGTATC AGTATAAGTT GATCCAGGGA ATTGATTTTT ATCGCTACGT TGACGATTGG
ATCGCGCAAC GACCGCAGAT CACCCGCTTA CAGGGGACTA TTGATCGGTT TATCGAGTTG
CCCGACGGTG TAGCTGTCGT TGTTGGTGGT AAGACGTACA CCGCGCGGTT TGGTTTTAAT
AGCGTGTATC GCCCCACTCC TACGCCACCC GGTTATCACT CGTGGCTGCA ACATTTTAAA
GGATGGGTCA TCACTACGCC TCGTCCGGTG TTTGATGCCG AAGCCGCTAC TTTTATGGAC
TTCCGCATTC CACAGGTTGG TGATGTCCGG TTTGGCTATG TCTTACCGTT CGATACCTAT
ACTGCGCTCG TCGAATATAC TATCTTCTCA CCCCAACTCG TCAGCCAGGC CGAATACGAA
GCCGGTTTGC AGCGGTACAT TGCCGATCAA CTCGGTATTG ACCGCTATGA GATTACGCAC
GTCGAGTATG GCGTCATCCC GATGAGTGAT GTGCCGTTGC CGCTGCGCCC TAGCCCTCAT
GTGCTCAATA TCGGTACCGC AGGGGGGATG AGTAAGCCAT CGACCGGCTA CACCTTCCAG
CGTATTCAGT GGCAGGTGCG CCAGATTGTC GAGAGTCTGC TACGGAATGG GCATCCGTTC
TACAAGCCGC CACGCTTCAA CCGGCATGCA CTGATGGATA GCGTGCTGCT TAACGTGCTC
GATGCCGGAC GCACGCCGGG GCATCGTTTC TTCGCCAATC TGTTCCGTCA TAACCCGATC
CAGCGCGTAC TTCGCTTCCT CGATGAGGAG ACGACACTTG CTGAGGATTT GGCCTTGATG
TCAACGGTGG AGATTACGCC GTTTATGGTT GCGGCGTTGG CGGTGGCGTG GGGGCGTATG
AGTGCGTTGG GGCGGCGTGA GTTGGAGATG GGGTGA
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| Protein sequence | MDYDYIIAGA GAAGLSLAYH LGQSPLAGHS ILLVDPNAVR RNDRTWCFWE VGTGPFEAVV
SRRWDYLWLY DESWSARLAI APYQYKLIQG IDFYRYVDDW IAQRPQITRL QGTIDRFIEL
PDGVAVVVGG KTYTARFGFN SVYRPTPTPP GYHSWLQHFK GWVITTPRPV FDAEAATFMD
FRIPQVGDVR FGYVLPFDTY TALVEYTIFS PQLVSQAEYE AGLQRYIADQ LGIDRYEITH
VEYGVIPMSD VPLPLRPSPH VLNIGTAGGM SKPSTGYTFQ RIQWQVRQIV ESLLRNGHPF
YKPPRFNRHA LMDSVLLNVL DAGRTPGHRF FANLFRHNPI QRVLRFLDEE TTLAEDLALM
STVEITPFMV AALAVAWGRM SALGRRELEM G
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