Gene Cagg_1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1522 
Symbol 
ID7267299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1859771 
End bp1860763 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content55% 
IMG OID643566365 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_002462861 
Protein GI219848428 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATT TTCCGTTATT TCCCGATCAG GCGTCGACCT TTGCGACACA GGTTGACCAG 
CTCTACTTCT TTCTGGTGGC CCTGAGCCTA CTGTTTGCCG GTGTGCTGCC GTTTGTCATT
CTCTACCTGA TTGTTCGCTA TCATCGCAGT CAGAAAGTTG ATCGTAGCAA TCCGGTCGAC
TCAAATCTAA AACTCGAATT AACGTGGACG TTGATCCCGC TCGCACTGGT GATGCTGGTC
TTCTTCTGGG GTGCGTTTTT ATACGTGCAA ATACGTACCG TACCAGACCG TACTCTCGAT
GTCTACGTGA TCGGCAAGCA GTGGATGTGG CACGTGCAGC ATCCGAACGG CAAGCGCGAA
AACAATGAGT TGCACGTACC GGTTGGTCAG CCGGTGAAGC TGATTATGAC TTCACAAGAT
GTTATTCACA GCTTCTACGT CCCGGCGTTC CGTGTGAAAC AAGATGTCTT GCCCGGACGC
TACACCGTTA TGTGGTTCGA GGCGAGCAAG CCCGGTGAAT ATCATCTGTT CTGCGCCGAG
TATTGCGGTA CTGAGCACTC GCTGATGATC GGACGGGTGG TGGCCCTGCC GCTGGCCGAT
TACGAGCGTT GGCTGGCAAC ACCCGGCCCG GTCGTGCTCC CTGATGGCAC GATTGATACC
GGTCAGCCAT TGGTTGTTTC AACGCCGGGT GACCCAATGG CAGCAGCCGG TGAGGGTCTC
TTTACAAGCC TTGGCTGCGC GGGCTGTCAC GCGATGGCCG GTGGTGGTGT GGGACCGAGT
CTGCAAGGCC TCTACGGCGC AACCGAGAAA TTGGCCGATG GCGCGACGGT TGTAGCTGAT
GAGAACTACT TGCGCGAGTC GATCCTCAAC CCAAATGCAA AGATCGTCGC TGGCTATGCT
GCTGTGATGC CGTCGTACCA AGGGCAGATC AGTGAAGATC AGCTTAACCA ACTGATCGCG
TATATTAAGT CGCTCGCTGA TACGGGGAAC TAA
 
Protein sequence
MRDFPLFPDQ ASTFATQVDQ LYFFLVALSL LFAGVLPFVI LYLIVRYHRS QKVDRSNPVD 
SNLKLELTWT LIPLALVMLV FFWGAFLYVQ IRTVPDRTLD VYVIGKQWMW HVQHPNGKRE
NNELHVPVGQ PVKLIMTSQD VIHSFYVPAF RVKQDVLPGR YTVMWFEASK PGEYHLFCAE
YCGTEHSLMI GRVVALPLAD YERWLATPGP VVLPDGTIDT GQPLVVSTPG DPMAAAGEGL
FTSLGCAGCH AMAGGGVGPS LQGLYGATEK LADGATVVAD ENYLRESILN PNAKIVAGYA
AVMPSYQGQI SEDQLNQLIA YIKSLADTGN