Gene Cagg_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1482 
Symbol 
ID7266123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1815571 
End bp1815855 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content53% 
IMG OID643566327 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002462823 
Protein GI219848390 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.336107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.724042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACGG CCCATACTGC TGACGTTAAG AGCTTTGCGA TTGGGGCGAT GACGCTCCGC 
CCATTTGCCG GCCAAGAACT GATGGCGGTT CGTGTCGAAG CACCTAAGGG AGCGGTGGCA
CCTGCCCATA GCCATCCTCA CGAGCAAATG ACATTGGTCC TCAGCGGACG AGTTCGTTTT
CGTGTTGGTG ACGAATGGCA AGAACTTGGG CCGATGGATA TTGTCCATAT TCCCGGTGGT
ATCGAACACG AAGCAATAAT GGAAGAAGAC TCGCTCTTTT TTTGA
 
Protein sequence
MKTAHTADVK SFAIGAMTLR PFAGQELMAV RVEAPKGAVA PAHSHPHEQM TLVLSGRVRF 
RVGDEWQELG PMDIVHIPGG IEHEAIMEED SLFF