Gene Cagg_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1379 
Symbol 
ID7267231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1705658 
End bp1707262 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content47% 
IMG OID643566222 
Productmodification methylase NspV 
Protein accessionYP_002462722 
Protein GI219848289 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC AACAACAACG CAAAGCCGAA TTTGGGGATT TTCAAACGCC CCTCAGCTTA 
GCCAGGGAAG TATGTTCCCT TATCGCTCGG ACTGGTTTTC GTCCCGCTTC GATTCTCGAA
CCAACATGTG GGACGGGTTC GTTTCTCAAA GCATCTTTAG AAACATTCCC AGACGTATCG
CGTGTTCTTG GCTTTGAGAT CAATCCGCAA TACGTGTTGC AAGCGCAGTA TGCTGTCACA
CGCGCATTTC CTCATGCGTC CATTGAAGTT CATCAGTCTG ATTTCTTTCT CACGAGTTGG
TCTGAGATTG TTAAAGCGTT GCCTGAGCCC ATTCTTGTTA TAGGCAATCC ACCCTGGGTG
ACGAATGCAG CGTTGAGCAC TTGGGGCAGT AGCAATGTTC CGATGAAATC AAACCTCGAC
AATCTCCCTG GTATTGATGC GCTCACCGGT AAGAGTAATT TCGACATTTC GGAATGGATG
CTTAGAAAGA ACATCGAATG GCTGAATGGC AAAAACGTCA TACTTGCAAT GCTTTGTAAA
ACGACAGTAG CACGTAAAGT TCTCTTGTAC GCTTGGCAAA ACGGTGTGCG GATCGAATCG
GCATCACTTT ATACCATAGA CGCACAGGAG TACTTTAGAG CTTCGGTTGA CGCTTGCCTT
CTGTTCATTC GAAGCAATCC GACCGGCAAT AGCAAAGAAT GCCAGGTTTT TCGTTCTCTT
CATGCACAAC AACCCGATAG CTCGTTCGGT TTGCAGGATG GAATGCTTGT GGCTGATGTC
AAATCATACC TGAAACGGAA AGACCTCACA GGGACAGGCT TTAGGGGCTG GCGGTCAGGA
ATAAAGCATG ATTGCAGCAA AGTCTTTGAG CTGCGCATTG AACGTGGGAA TCTTGTTAAT
GGCCTAGGAG AATTCGTTGA GATTGAACCT GAAGTGCTCT TTCCTCTGTT AAAAAGTTCT
GATCTCGCAG CGCATAGGAA GCCGCATCGG TGGATGCTTG TTCCTCAACG GGCAATGAGT
GACGACCCGA GCCGTCTTAG GTTGGACGTT CCCAAGGCCT GGAATTACCT TACTGCCCAT
GCACATCTTT TGGACGAACG AAAGAGTTCA ATATACAGGA ACCGTCCGCG CTTCTCAGTC
TTTGGAGTTG GACCATATTC ATTTGCTCCC TGGAAGATTG CTATTTCGGG TTTATACAAG
AAACTTGAGT TTGTTCAAGT TCCACCTTTT CTGGGAAGCC CGGTGGTTCT CGACGACACA
TGTTATTTTT TCCCATGTCA GTCTGAAGAA GAATGCAATC TATTGTACGA ATTGGTTACA
TCCGAACCTG CCAGAGAGTT CTGGTCTGCA TTAATTTTCT GGGATGCAAA GCGGCCAATT
ACGGCACAAC TTCTTAACTC ACTTGATCTG ATGGTTCTTG CACGCCTCTT GGGTAAGGAA
TGTGATATAG CGCGAACTCT TGCGGAACGA CAGATTGTAG AATACACGGA AGGGGCTTTC
CAGAGACTCC TTTTCAGAGA AGAAACTGCT GATTATGACG GTGAACCGGT TACAAACGAA
TTCGATTTGC TAACCAATCA ACACATGCAT ACCGGGAAAC AGTAA
 
Protein sequence
MRDQQQRKAE FGDFQTPLSL AREVCSLIAR TGFRPASILE PTCGTGSFLK ASLETFPDVS 
RVLGFEINPQ YVLQAQYAVT RAFPHASIEV HQSDFFLTSW SEIVKALPEP ILVIGNPPWV
TNAALSTWGS SNVPMKSNLD NLPGIDALTG KSNFDISEWM LRKNIEWLNG KNVILAMLCK
TTVARKVLLY AWQNGVRIES ASLYTIDAQE YFRASVDACL LFIRSNPTGN SKECQVFRSL
HAQQPDSSFG LQDGMLVADV KSYLKRKDLT GTGFRGWRSG IKHDCSKVFE LRIERGNLVN
GLGEFVEIEP EVLFPLLKSS DLAAHRKPHR WMLVPQRAMS DDPSRLRLDV PKAWNYLTAH
AHLLDERKSS IYRNRPRFSV FGVGPYSFAP WKIAISGLYK KLEFVQVPPF LGSPVVLDDT
CYFFPCQSEE ECNLLYELVT SEPAREFWSA LIFWDAKRPI TAQLLNSLDL MVLARLLGKE
CDIARTLAER QIVEYTEGAF QRLLFREETA DYDGEPVTNE FDLLTNQHMH TGKQ